DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wnt4 and Wnt8a

DIOPT Version :10

Sequence 1:NP_476972.2 Gene:Wnt4 / 34007 FlyBaseID:FBgn0010453 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_001099625.1 Gene:Wnt8a / 291678 RGDID:1306312 Length:359 Species:Rattus norvegicus


Alignment Length:336 Identity:96/336 - (28%)
Similarity:163/336 - (48%) Gaps:62/336 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 VGGPCRYMPATRRQNHQCRKETGLPGTLSEARRLATTHCEEQFRYDRWNC-------SIETRGKR 293
            :.||..|:..|              .:::...::....|:.||.::||||       |..||.  
  Rat    34 ITGPKAYVTYT--------------ASVALGAQMGMEECKFQFAWERWNCPEHAFQFSTHTRP-- 82

  Fly   294 NIFKKLYKETAFVHALTAAAMTHSIARACAEGRMTKCSCGPKKHNRE-AQDFQWGGCNDNLKHGK 357
               :...:||:|:||:.:||:.:::.:.|:.|.:..|.|....:.:. ...:.||||:||::.|:
  Rat    83 ---RGATRETSFIHAIRSAAVMYAVTKNCSMGDLETCGCDESNNGKAGGHGWIWGGCSDNVEFGE 144

  Fly   358 RVTRSFLDL--RGGDGDEVSEILRHDSEVGIEAVSSQMMDKCKCHGVSGSCSMKTCWKKMADFNA 420
            :::|.|:|.  :|.|...:..:  |::..|..||.:.|...|||||:|||||::|||.::|||..
  Rat   145 KISRLFVDSLEKGKDARALMNL--HNNRAGRLAVRASMKRTCKCHGISGSCSIQTCWLQLADFRQ 207

  Fly   421 TATLLRQKYNEAIRKAPNQRSMRQVSSSRMKKPKQRRKKPQQ----SQYTTLYYLETSPSYC--- 478
            ....|:.||:.|::...::|.:|..:.:      :.|..|.:    |....|.:||.||.||   
  Rat   208 MGNYLKAKYDRALKIETDKRQLRAGNRA------EGRWAPIEAFLPSAEAELIFLEGSPDYCNRN 266

  Fly   479 -----AVTKDRQCL---------HPDNCGTLC--CGRGYTTQVVKQVEKCRCRFNNGRCCQLICD 527
                 ..|:.|:||         ...:||.||  ||.....:..:.|..|.|.|.  .||.:.|.
  Rat   267 ASLGIYGTEGRECLQNARSASRWEQRSCGRLCTECGLQVEERRTEAVSSCDCNFQ--WCCTVKCG 329

  Fly   528 YCQRLENKYFC 538
            .|:|:.|:|:|
  Rat   330 QCRRVVNRYYC 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt4NP_476972.2 Wnt_Wnt9 245..539 CDD:381715 93/327 (28%)
Wnt8aNP_001099625.1 Wnt 35..341 CDD:393294 96/335 (29%)

Return to query results.
Submit another query.