DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt4 and wnt1

DIOPT Version :9

Sequence 1:NP_001260187.1 Gene:Wnt4 / 34007 FlyBaseID:FBgn0010453 Length:539 Species:Drosophila melanogaster
Sequence 2:XP_002935152.1 Gene:wnt1 / 100491444 XenbaseID:XB-GENE-485280 Length:372 Species:Xenopus tropicalis


Alignment Length:370 Identity:118/370 - (31%)
Similarity:181/370 - (48%) Gaps:55/370 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 SNT---NNMDMQQGLYNEHFISEHTVMAVFTSQGQV--GGPCRYMP---------ATRRQNHQCR 254
            |||   ||.....|:.|            ..|.|.|  |...:.:|         .:|||....|
 Frog    22 SNTIAVNNSGKWWGIVN------------VASAGNVLPGSDAQPVPLVLDPSLQLLSRRQKRLIR 74

  Fly   255 KETGLPGTLSEARRLATTHCEEQFRYDRWNCSIETRGKRNIFKKLY----KETAFVHALTAAAMT 315
            :..|:..:::.....|...|:.|||..||||...|..:  :|.|:.    :|||||.|:|:|.:|
 Frog    75 QNPGILQSITRGLHSAIRECKWQFRNRRWNCPTGTGNQ--VFGKIINRGCRETAFVFAITSAGVT 137

  Fly   316 HSIARACAEGRMTKCSCGPKKHNREAQDFQWGGCNDNLKHGKRVTRSFLDL--RGGDGDEVSEIL 378
            ||:||:|:||.:..|||..::......|:.||||:||::.|:.:.|.|:|.  ||.|...:..: 
 Frog   138 HSVARSCSEGSIESCSCDYRRRGPGGPDWHWGGCSDNIEFGRFIGREFVDSSERGRDLKYLVNL- 201

  Fly   379 RHDSEVGIEAVSSQMMDKCKCHGVSGSCSMKTCWKKMADFNATATLLRQKYNEAIRKA-PNQRSM 442
             |:::.|...|.::|..:|||||:|||||::|||.::..|.:....|:.:::.|.:.. .|..|.
 Frog   202 -HNNQAGRLTVLTEMRQECKCHGMSGSCSLRTCWMRLPPFRSVGDALKDRFDGASKVTYSNNGSN 265

  Fly   443 RQVSSSRMKKPKQRRKKPQQSQYTT--LYYLETSPSYCAV--------TKDRQC----LHPDNCG 493
            |.  .||...|....:.|..:..::  |.|.|.||::|:.        |..|.|    |..|.|.
 Frog   266 RW--GSRSDPPHLEPENPTHALPSSQDLVYFEKSPNFCSASEKNGTPGTTGRICNSTSLGLDGCE 328

  Fly   494 TLCCGRGYTTQVVKQVEKCRCRFNNGRCCQLICDYCQRLENKYFC 538
            .|||||||.::..|..|:|.|.|:  .||.:.|..|...:..:.|
 Frog   329 LLCCGRGYRSRAEKVTERCHCTFH--WCCHVTCLNCTSSQIVHEC 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt4NP_001260187.1 wnt 246..539 CDD:278536 106/314 (34%)
wnt1XP_002935152.1 Wnt_Wnt1 65..372 CDD:381707 106/315 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D280593at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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