DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt4 and wnt3a

DIOPT Version :9

Sequence 1:NP_001260187.1 Gene:Wnt4 / 34007 FlyBaseID:FBgn0010453 Length:539 Species:Drosophila melanogaster
Sequence 2:XP_002939354.2 Gene:wnt3a / 100488632 XenbaseID:XB-GENE-1217288 Length:352 Species:Xenopus tropicalis


Alignment Length:324 Identity:110/324 - (33%)
Similarity:162/324 - (50%) Gaps:35/324 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 PCRYMPA-TRRQNHQCRKETGLPGTLSEARRLATTHCEEQFRYDRWNCSIETRGKRN------IF 296
            ||..:|. ..:|...||....:..:::|..::....|:.|||..||||   |....|      :.
 Frog    41 PCGTIPGLVAKQMRFCRNYMEIMPSVAEGVKIGIQECQHQFRGRRWNC---TTVNDNLAIFGPVL 102

  Fly   297 KKLYKETAFVHALTAAAMTHSIARACAEGRMTKCSCGPKKHNREAQDFQWGGCNDNLKHGKRVTR 361
            .|..:|:|||||:.:|.:..::.|:||||..|.|.|.........:.::||||::::..|..|:|
 Frog   103 DKATRESAFVHAIASAGVAFAVTRSCAEGSATICGCDSHHKGPPGEGWKWGGCSEDMDFGSMVSR 167

  Fly   362 SFLDLRGGDGDEVSEILRHDSEVGIEAVSSQMMDKCKCHGVSGSCSMKTCWKKMADFNATATLLR 426
            .|.|.|....|..|.:.||::|.|..::......||||||:||||.:||||....||......|:
 Frog   168 EFADARENRPDARSAMNRHNNEAGRTSILDHRHLKCKCHGLSGSCEVKTCWWSQPDFRVIGDYLK 232

  Fly   427 QKYNEA----IRKAPNQRSMRQVSSSRMKKPKQRRKKPQQSQYTTLYYLETSPSYCAV------- 480
            .||:.|    :.|  ::.|...|.:.|   ||....||...:  .|.|.|:||::|..       
 Frog   233 DKYDSASEMVVEK--HRESRGWVETLR---PKYTFFKPPTER--DLIYYESSPNFCEPNPETGSF 290

  Fly   481 -TKDRQC---LHP-DNCGTLCCGRGYTTQVVKQVEKCRCRFNNGRCCQLICDYCQRLENKYFCK 539
             |:||.|   .|. |.|..||||||:.|:..|:.|||.|.|:  .||.:.|..|.|:.:.:.||
 Frog   291 GTRDRVCNVTSHGIDGCDLLCCGRGHNTRTEKRKEKCHCIFH--WCCYVSCQECIRVYDVHTCK 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt4NP_001260187.1 wnt 246..539 CDD:278536 105/314 (33%)
wnt3aXP_002939354.2 Wnt_Wnt3_Wnt3a 39..352 CDD:381709 108/322 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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