DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ndae1 and slc4a1a

DIOPT Version :9

Sequence 1:NP_723263.2 Gene:Ndae1 / 34005 FlyBaseID:FBgn0259111 Length:1190 Species:Drosophila melanogaster
Sequence 2:NP_938152.1 Gene:slc4a1a / 84703 ZFINID:ZDB-GENE-010525-1 Length:905 Species:Danio rerio


Alignment Length:984 Identity:331/984 - (33%)
Similarity:503/984 - (51%) Gaps:171/984 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 KQQEVERPVTPPAQRVQFILGEDVDDGTHVSHPLFSEMGMLVKEGD------------EIEWKET 158
            :||..|:|.|       |....|::...:.:       ...:|.||            || |:||
Zfish    43 RQQGEEQPQT-------FTFNRDLEAARNTN-------TNAIKRGDAESYVELNELRGEI-WQET 92

  Fly   159 ARWIKFEEDVEEGGNRWSKPHVATLSLHSLFELRRLLVNGSVMLDMEAQNLEVMADLVCDHMVSA 223
            .||:.|||:......:||:.||:.|:..||.:||:::..|:|:||::..:|..:...:.:.::..
Zfish    93 GRWVGFEENFSPATGQWSQSHVSYLTFKSLIQLRKVMSTGAVLLDVDDSSLSSIGQKMVEQLLLK 157

  Fly   224 GTLPPGVKDKVKDALLRRHRHQHEYAKKTRLPIIR-SLADMRNHSSSKKKKSNSKHSRPAQNLSS 287
            ..:.|..:|.:. .:|:|.|.|.|       |::. ..||:...:.|..|:              
Zfish   158 KEIRPSDRDALV-TILQRKRSQLE-------PVVSPGSADLELQTFSVTKQ-------------- 200

  Fly   288 ITEDMVKSPSNQSMARPGSGTELSEQQHKGNTHFMRKIPPGAEASNILVGEVDFLERTLSCFIRL 352
              .|.|..                                 .|.|.:|.|.|:.|::.:..|.||
Zfish   201 --RDQVDR---------------------------------VEGSVVLSGVVENLQKPVVAFARL 230

  Fly   353 SQAVVLGDLTEVPVPTRFVFILLGPPGSQSNFHEIGRAMATLMSDEIFHEVAYRARKRDHLLSGV 417
            ..:||:..:.|..:|.||||.|:||..|..::||.|||||.||:|.:|...||.|.....|.:.:
Zfish   231 RDSVVMEGVLEASIPVRFVFFLVGPSHSGMDYHESGRAMAALMADWVFSLEAYLATNERDLYNAM 295

  Fly   418 DEFLDAVTVLPPGEWDPTIRIEPPAAIPSQEV--RKRP--------------PELPKEEVDEEEE 466
            .:|:|...|:||.:......::|......:.:  |.||              |..|:|:      
Zfish   296 ADFMDCSIVIPPTDIQDDSMLKPIINFQKKMLHDRVRPYDTRIMVGGKAPTGPAKPRED------ 354

  Fly   467 EARLREENGLSRTGRLFGGLINDIKRKAPWYISDYKDALSMQCVASWIFLYFACLSPIITFGGLL 531
                    .|:|||..|||::.||||:...|:||:.|||..|.:::.||:|||.|||.|||||||
Zfish   355 --------PLARTGLPFGGMVKDIKRRYKHYLSDFTDALDPQVLSAVIFIYFAALSPAITFGGLL 411

  Fly   532 AEATGKHMAAMESLVSGFVCGMGYGFFSGQPLTILGSTGPVLVFESIIYEFCLKMGWDYMTFRFW 596
            |:.|...|...|.:||..|.|:.:..|:.||:.::|.|||::|||...::||...|::|:..|.|
Zfish   412 ADKTEHMMGVSEMMVSTCVQGVIFCLFAAQPVLVIGFTGPLMVFEEAFFQFCKGYGFEYIVGRVW 476

  Fly   597 IGMWVAGICIVLTAIDASALVCYITRFTEENFATLIAFIFIYKAIENVMVIGKNFPVNQGIYDCV 661
            :|||:..|.:::.|::.|.||.:|:|||:|.|:.||:.||||:....::.|.|..|:        
Zfish   477 VGMWLIVIVVIIMAVEGSFLVRFISRFTQEIFSILISLIFIYETFSKLIKIFKAHPL-------- 533

  Fly   662 CTPPIGSNASVIDYAKYNWDSCES--------YNGTLVGGDCGTPPTE-------NVFLMSVVLC 711
                      :::|...| ||.:.        .|.||......|...|       |..|:|:.|.
Zfish   534 ----------ILNYEHLN-DSLDDPFHPIKKVINVTLHPDGNVTEHHEIIERAYPNTALLSMCLM 587

  Fly   712 AGTFLISTVLKEFKNALFFPSIVRQYISDFSVLIAIFAMSFFDYSLG-VPTQKLEVPNELK-PTL 774
            .|.|.|:..|:.||.:.:.|..:|:.:.||.|.||||.|...|.|:. ..||||.||..|. ...
Zfish   588 FGCFFIALYLRGFKTSTYLPGPIRRMVGDFGVPIAIFFMIAVDISISDAYTQKLVVPKGLTVSNT 652

  Fly   775 STRGWLIPPFVEKN--PWWSAIIAVFPALLGTILIFMDQQITAVIVNRKENKLKKGCGYHLDLFI 837
            |.|||.|.||.||.  |.|.....|.||:|..||||::.|||.:||::.|.|:.||.|:|:||.:
Zfish   653 SARGWFISPFGEKKTFPVWMMFACVVPAMLVFILIFLESQITTLIVSKPERKMVKGSGFHVDLLL 717

  Fly   838 LSILIAICSMMGLPWFVAATVLSINHVNSLKLESECSAPGEKPQFLGVREQRVTHILIFLTIGVS 902
            |..|..:.|:.|:||..||||.|:.|.|:|.:.::    |.:||...|.||||:.||:.:.:|||
Zfish   718 LVFLGGVGSLFGVPWLSAATVRSVTHANALTVMTK----GPRPQIERVLEQRVSGILVAVMVGVS 778

  Fly   903 VLLTPLLGNIPMPVLFGVFLYMGVASLKGLQFFDRILIMFMPAKYQPDYMFLRQVPIKRVHLFTM 967
            :|:.|:|..|||..|||:|||||:.||.|:|.:||:|::..|.|:.|...::.:||..|:||:|:
Zfish   779 ILMEPILKMIPMTALFGIFLYMGITSLSGIQLWDRMLLLITPKKHHPAVPYVTRVPTMRMHLYTL 843

  Fly   968 IQLACLIILWLIKSFSQTSILFPLMLVVMIGIRKAL-DLVFTRRELKILDDIMPEMTKRAAADDL 1031
            ||:.||.:||::|| |..|:..|.:|::.|.:|..: ..|||..|:|.||           |||.
Zfish   844 IQVMCLALLWVVKS-SNFSLALPFVLILTIPLRMFMTGHVFTVMEMKCLD-----------ADDA 896

  Fly  1032 H-KLDAEDN 1039
            : |.|.||:
Zfish   897 NVKFDDEDD 905

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ndae1NP_723263.2 ae 140..1016 CDD:273290 315/924 (34%)
Band_3_cyto 167..435 CDD:284893 69/268 (26%)
HCO3_cotransp 476..968 CDD:279322 207/510 (41%)
slc4a1aNP_938152.1 ae 78..904 CDD:273290 319/932 (34%)
Band_3_cyto 106..309 CDD:284893 69/259 (27%)
HCO3_cotransp 356..844 CDD:279322 207/510 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575028
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265068at2759
OrthoFinder 1 1.000 - - FOG0000136
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100185
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X102
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.750

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