DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ndae1 and AT3G62270

DIOPT Version :9

Sequence 1:NP_723263.2 Gene:Ndae1 / 34005 FlyBaseID:FBgn0259111 Length:1190 Species:Drosophila melanogaster
Sequence 2:NP_191786.1 Gene:AT3G62270 / 825400 AraportID:AT3G62270 Length:703 Species:Arabidopsis thaliana


Alignment Length:777 Identity:176/777 - (22%)
Similarity:307/777 - (39%) Gaps:183/777 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   483 FGGLINDIKRKAPWYISDYKDAL--SMQCVASWIFLYFACLSPIITFGGLLAEATGKHMAAMESL 545
            |.|:.||:|.:...|..|:...:  ..:.:|...:::||...|:|:||..|..:|...:.|:::|
plant     8 FEGIKNDLKGRLMCYKQDWTGGIKAGFRILAPTTYIFFASAIPVISFGEQLERSTDGVLTAVQTL 72

  Fly   546 VSGFVCGMGYGFFSGQPLTILGSTGPVLVFESIIYEFCL---KMGWD-YMTFRFWIGMWVAGICI 606
            .|..:||:.:....||||.|||...|.::..:.::.|..   ::|.: ::.:..|:.:|.:.|..
plant    73 ASTAICGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKGRPELGRNLFLAWSGWVCVWTSLILF 137

  Fly   607 VLTAIDASALVCYITRFTEENFATLIAFIFIYKAIENVMVIGKNFPVNQGIYDCVCTPPIGSNAS 671
            ||....|.:.:...||...|.|..|||.:|:.:||             :|:.| ....|...:..
plant   138 VLAICGACSFINRFTRVAGELFGLLIAMLFMQQAI-------------KGLVD-EFRAPAREDLK 188

  Fly   672 VIDYAKYNWDSCESYNGTLVGGDCGTPPTENVFLMSVVLCAGTFLISTVLKEFKNALFFPSIVRQ 736
            ::::.. :|   ...||                :.::||..|..:.:...::.::..:....:|.
plant   189 LVEFLP-SW---RFANG----------------MFALVLSFGLLITALRSRKARSWRYGTGWLRS 233

  Fly   737 YISDFSVLIAIF---AMSFF---DYSLGVPTQKLEVPNELKPTLSTRGWLIPPFVEKNPWWSAII 795
            .::|:.|.:.:.   .:|:.   |...|:| ::|..||...|. :...|.:...:.:.|....|.
plant   234 LVADYGVPLMVLVWTGVSYIPTGDVPKGIP-RRLFSPNPWSPG-AYENWTVVKEMLQVPIVYIIG 296

  Fly   796 AVFPALLGTILIFMDQQITAVIVNRKENKLKKGCGYHLDLFILSILIAICSMMGLPWFVAATVLS 860
            |..||.:..:|.:.|..:.:.:..:||..|:|...||.||.:|..|..:|.::|:|........|
plant   297 AFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLMCGLLGIPPSNGVIPQS 361

  Fly   861 INHVNSLK------LESECSAPGEK------------------------------PQ-------- 881
            ..|..||.      |.:...|...|                              ||        
plant   362 PMHTKSLATLKYQLLRNRLVATARKSIKQNASLGQLYGNMQDVYNQMQTPLVYQQPQGLKELRES 426

  Fly   882 ------FLG------------------------VREQRVTHILIFLTIGVSVLLTPLLGNIPMPV 916
                  |.|                        |:||||:::|..:.:|..|...|||..||..|
plant   427 TIQATTFTGNLDAPVDETLFDIEKEIDDLLPIEVKEQRVSNLLQAVMVGGCVAAMPLLKMIPTSV 491

  Fly   917 LFGVFLYMGVASLKGLQFFDRILIMF-MPA---KYQPD--YMFLRQVPIKRVHLFTMIQ----LA 971
            |:|.|.:|.:.||.|.||::|||::| .|:   |...|  ..|:..||.|.:.:||:.|    |.
plant   492 LWGYFAFMAIESLPGNQFWERILLLFTAPSRRFKVLEDNHATFVETVPFKTIAMFTIFQTTYLLT 556

  Fly   972 CLIILWLIKSFSQTSILFPLMLVVMIGIRKALDLVFTRRELKILDDIMPEMTKRAAADDLHKLDA 1036
            |..:.|:    ....::|||:::.:|.:|:.               |:|...|.|...||...:.
plant   557 CFGLTWI----PIAGVMFPLLIMFLIPVRQY---------------ILPRFFKSAHLQDLDAAEY 602

  Fly  1037 EDN-----HHQHPPGS-GAGANYNADKSGPTTIHIPLSGNKTGTKGPTVNIPQEAVNRTAVWQQI 1095
            |:.     |...|... |:.|:|..|............|....|..|.|.    :...|.|:   
plant   603 EEAPALPFHLAVPEAEMGSTASYPCDSEILDEFITRSRGEFRHTCSPKVT----SSTSTPVY--- 660

  Fly  1096 NKDGNGISEQLIIPVTLKVRQINGNHAPSSATLSPRLSPMHEADEYSEAPTNSPAHPAGNQQ 1157
                |....|:..|..:.:|          ..:|||||     .:...:|..||.:|:.:.:
plant   661 ----NRNLSQVFSPRVIDLR----------GEMSPRLS-----GKGQNSPKPSPLNPSSSSK 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ndae1NP_723263.2 ae 140..1016 CDD:273290 144/628 (23%)
Band_3_cyto 167..435 CDD:284893
HCO3_cotransp 476..968 CDD:279322 135/576 (23%)
AT3G62270NP_191786.1 Xan_ur_permease 2..549 CDD:419983 135/576 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1172
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265068at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1016
orthoMCL 1 0.900 - - OOG6_100185
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X102
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.720

Return to query results.
Submit another query.