DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ndae1 and SPBC543.05c

DIOPT Version :9

Sequence 1:NP_723263.2 Gene:Ndae1 / 34005 FlyBaseID:FBgn0259111 Length:1190 Species:Drosophila melanogaster
Sequence 2:NP_596793.1 Gene:SPBC543.05c / 2540261 PomBaseID:SPBC543.05c Length:517 Species:Schizosaccharomyces pombe


Alignment Length:557 Identity:138/557 - (24%)
Similarity:238/557 - (42%) Gaps:81/557 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   482 LFGG-LINDIKRKAPWYISDYKDALSMQCVASWIFLYFACLSPIITFGGLLAEATGKHMAAMESL 545
            :||. ::||:|::.|:|.||:.||...:.:.:.:.:||:.|.|.:.|...:...|.......|.|
pombe    11 IFGSEIVNDVKKRLPYYKSDWIDACHYRVLPACLNIYFSNLLPELAFALDMFAKTNNSFGVNEVL 75

  Fly   546 VSGFVCGMGYGFFSGQPLTILGSTGPVLVFESIIYEFCLKMGWDYMTFRFWIGMWVAGICIVLTA 610
            ::..:..:.:...|.|||.|:|.|||:.||...:|:.....|..|..|..||.:|......::..
pombe    76 LASVLGSVVFALLSSQPLCIVGVTGPITVFNYTVYDIMHDRGTPYFPFLCWICLWSMIFHFIIAI 140

  Fly   611 IDASALVCYITRFTEENFATLIAFIFIYKAIENVMVIGKNFPVNQGIYDCVCTPPIGSNASVIDY 675
            .:....|.:||:|:.|.|...:|||::.|.::                 .:|           |.
pombe   141 ANGVYFVKHITKFSCEIFGLYVAFIYLEKGVQ-----------------VLC-----------DQ 177

  Fly   676 AKYNWDSCESYNGTLVGGDCGTPPTENVFLMSVVLCAGTFLISTVLKEFKNALFFPSIVRQYISD 740
            .||.                    ..|.|| |:.:.....::..:......:..|...||..:.|
pombe   178 LKYG--------------------LTNTFL-SITIALLFLMVGWLCDTVGKSSLFSYKVRILLLD 221

  Fly   741 FSVLIAIFAMSFFDYSLG----VPTQKLEVPNELKPTLSTRGWLIPPFVEKNPWWSAIIAVFPAL 801
            :.::.:|...|.|.: :|    |...||......:|||| |.|.|..:  |.|.....:|:..::
pombe   222 YGLVASIIFFSGFQH-IGKMREVSLAKLPTTKAFEPTLS-RSWFIKFW--KIPVGDVFLAIPFSI 282

  Fly   802 LGTILIFMDQQITAVIVNRKENKLKKGCGYHLDLFILSILIAICSMMGL----------PWFVAA 856
            :.|||.:.|..:::|:.......|.|..|:|.|.|:|.|...:..::|:          |...||
pombe   283 VLTILFYFDHNVSSVMAQDPSFPLTKPAGFHWDFFLLGITTGVSGILGIPAPNGLIPQAPMHTAA 347

  Fly   857 TVLSINHVNSLKLESECSAPGEKPQFLGVREQRVTHILI-FLTIGVSVLLTPL---LGNIPMPVL 917
              |.:..|:..:.|.|.:   .|.....|.|||.::.:. .:|:|  .:..||   |..||..||
pombe   348 --LCVKRVDYDEDEIEKT---HKEVIDRVVEQRASNFIQGLMTVG--TMTGPLLLVLHQIPQCVL 405

  Fly   918 FGVFLYMGVASLKGLQFFDRILIMFMPAKYQPDYMFLRQVPIKR-VHLFTMIQLACLIILWLIKS 981
            .|:|..||.:::.|......::.|....|.......|.....|| |.|:|::||......:.|..
pombe   406 AGLFWVMGFSAIFGNGITQNVIWMLSDRKVVSKNHTLNHCSSKRVVWLYTILQLIGFGATFAITQ 470

  Fly   982 FSQTSILFPLMLVVMIGIRK-ALDLVFTRRELKILDD 1017
            ..:.||.||::::::|..|. .:...|...:|:|||:
pombe   471 VDKASIGFPIIILLLIPFRTYCMPKWFLEEDLEILDE 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ndae1NP_723263.2 ae 140..1016 CDD:273290 136/554 (25%)
Band_3_cyto 167..435 CDD:284893
HCO3_cotransp 476..968 CDD:279322 124/505 (25%)
SPBC543.05cNP_596793.1 HCO3_cotransp 12..420 CDD:304903 115/467 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 58 1.000 Domainoid score I3079
eggNOG 1 0.900 - - E1_KOG1172
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000136
OrthoInspector 1 1.000 - - otm47125
orthoMCL 1 0.900 - - OOG6_100185
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1874
SonicParanoid 1 1.000 - - X102
TreeFam 00.000 Not matched by this tool.
98.740

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