DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ndae1 and abts-4

DIOPT Version :9

Sequence 1:NP_723263.2 Gene:Ndae1 / 34005 FlyBaseID:FBgn0259111 Length:1190 Species:Drosophila melanogaster
Sequence 2:NP_001024826.2 Gene:abts-4 / 180943 WormBaseID:WBGene00019844 Length:956 Species:Caenorhabditis elegans


Alignment Length:1017 Identity:234/1017 - (23%)
Similarity:439/1017 - (43%) Gaps:133/1017 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 GSIGGSGSVGGGAGKDNVSEKQQEVERPVTPPAQRVQFILGE---------------DVDDGTHV 135
            ||.|...:.....|.|:...:...||...|||...:..:|..               .::|....
 Worm     4 GSPGRHSNKAFSIGSDDGENENVFVEETSTPPKTPLGTLLTNCTEQSPLILPMPTRPRLEDSPVA 68

  Fly   136 SHPLFSEMGMLVKEGDEIEWKETARWIKFEEDVEEGGNRWSKPHVATLSLHSLFELRRLLVNGSV 200
            .|.....:.:.....|:..||:.:|:.::|||.|...|...:|||..:.:.:...|:.:.....:
 Worm    69 EHDHHIVVDVFTVNNDDGTWKQASRFARYEEDCEGFDNHLGRPHVPCIPMGTYDALKMVTAKSIL 133

  Fly   201 MLDMEAQNLEVMADLVCDHMVSAGTLPPGVKDKVKDALLRRHRHQHEYAKKTRLPIIRSLADMRN 265
            ...::.::|:...:.:...:|....  |.:.:|:...:            ..|:..|..:..:..
 Worm   134 FPKVQYESLDEFVNFLETKIVDPDV--PKLGEKIAKLI------------NDRIAEIEKMRPLHQ 184

  Fly   266 HSSSKKKKSNSKHSRPAQNLSSITEDMVKSPSNQSMARPGSGTELSEQQHKGNTHFMRKIPPG-- 328
            .:||..:..::.:.:....:......::.:|:|           |....|    |.||::|..  
 Worm   185 RNSSSTQSLDASNPQTISTVGIFPRSLLSAPNN-----------LGSLAH----HPMRRLPTSHS 234

  Fly   329 --------------------------AEASNILVGEVDFLERTLSCFIRLSQAVVLGDLTEVPVP 367
                                      .|.|.::.||:..:.......||..:...:..:......
 Worm   235 GLRFGSSFLPQQPVVSQLEPVIWDEDNEISMLVAGEIPHVNVCRFIAIRFVETTAMEKIFPNMTN 299

  Fly   368 TRFVFILLGPPGSQSNFHEIGRAMATLMSDEIFHEVAYRARKRDHLLSGVDEFLDAVTVLPPGEW 432
            .|.:|.|:||......:.::|||:|:::|:........:.:..|.:...::.||....|:.||  
 Worm   300 VRHLFFLIGPALENVTYLDLGRALASVVSNPPATTTFDQLKSPDSITKAIERFLAGTVVIAPG-- 362

  Fly   433 DPTIRIEPPAAIPSQEVRK---------RPPELPKEEVDEEEEEARLREENGLSRTGRLFGGLIN 488
                ||:....:.|..:||         ....:..::||.|....:..|| ...:..|||.|:.:
 Worm   363 ----RIDNKNLVRSDLIRKLVNMQGEKTETKIVHPKDVDVERNATKKAEE-AEDKPFRLFSGVTS 422

  Fly   489 DIKRKAPWYISDYKDALSMQCVASWIFLYFACLSPIITFGGLLAEATGKHMAAMESLVSGFVCGM 553
            |::.:|..|.|||:|..::.......:::...:.|.:|||.::...|...:|..|.|||..:.|:
 Worm   423 DLRNRAKHYFSDYRDGFNISIFTVVFYMFCVTVVPTLTFGAIMGAGTSGLLAVKECLVSQALSGL 487

  Fly   554 GYGFFSGQPLTILGSTGPVLVFESIIYEFCLKMGWDYMTFRFWIGMWVAGICIVLTAIDASALVC 618
            .:...|.|||.::..|||.||||..:::|..:...|::..||:.|:::..|.||..|.:.:.|:.
 Worm   488 IWSVLSCQPLLVMSPTGPFLVFEKALFKFTDQNDMDFLEVRFYTGIFLFFISIVGAATNCAHLIH 552

  Fly   619 YITRFTEENFATLIAFIFIYKAIENVMVIGKNFPVNQGIYDCVCTPPIGSNASVIDYAKYNWDSC 683
            |:|.:||:.|..||:.||..:.:|.:                    .:....:.|:..||..::.
 Worm   553 YVTIYTEDIFCALISLIFFSEVVEFI--------------------HLQEEHNSIENLKYYIENA 597

  Fly   684 ESYNGTLVGGDCGTPPTENVFLMSVVLCAGTFLISTVLKEFKNALFFPSIVRQYISDFSVLIAIF 748
            .:...|.| .||.. ...|.||:.:::...:..|...|::...:.||....|....:|..:.|:.
 Worm   598 ANCTVTEV-KDCAL-SRPNTFLLQLIMVVVSIAIFHYLRQVSRSTFFGRTFRNLCKNFGGIFAVI 660

  Fly   749 AMS----FFDYSLGVPTQKLEVPNELKPTLSTRGWLIPPFVEKNPWWSAI-IAVFPALLGTILIF 808
            |:|    ....::||..  :::|..:..:....|..:.|  ...|..|.: ||:..::|..:|||
 Worm   661 AVSIAYRILFQNVGVAV--VDIPVAVGQSRPFDGIFVIP--SAPPTASTLTIALISSILLFVLIF 721

  Fly   809 MDQQITAVIVNRKENKLKKGCGYHLDLFILSILIAICSMMGLPWFVAATVLSINHVNSLKLESEC 873
            ::.:|...:..|:..|||||.|.|.||.::.....:.|::||||...|.|.|:.|:.|| .|.:.
 Worm   722 VETEIPEQMALREGRKLKKGGGLHWDLIVVGFCTLVSSVLGLPWMCPAAVQSLAHITSL-TEYKK 785

  Fly   874 SAPGEKPQFLGVREQRVTHILIFLTIGVSVLLTPLLGNIPMPVLFGVFLYMGVASLKGLQFFDRI 938
            ||||...:...|.||||:.::.:|.:|...:|...|. ||...:||||.|:||.:|:|.:...|:
 Worm   786 SAPGVPSRISHVIEQRVSGMVTYLLLGTFAILGHFLA-IPAATIFGVFFYLGVRNLEGSKMILRL 849

  Fly   939 LIMFMPAKYQPDYMFLRQVPIKRVHLFTMIQLACLIILWLIKSFSQTSILFPLMLVV-MIGIRKA 1002
            .:.|:|:||:..:.||...|...:.::|:||......::..||.....:||||.:|. .|.::..
 Worm   850 KLCFLPSKYRGSHKFLEIAPFYTIQIYTVIQYLIAGAMFAAKSSKIGGLLFPLFIVSNAIFVKHG 914

  Fly  1003 LDLVFTRRELKILDDIMPEMTKRAAADDLHKLDAEDNHHQHP 1044
            |.::|.:..|:.||           ::|....||:.::.::|
 Worm   915 LSVIFDKELLEALD-----------SEDHDNDDADRDNEENP 945

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ndae1NP_723263.2 ae 140..1016 CDD:273290 215/918 (23%)
Band_3_cyto 167..435 CDD:284893 45/295 (15%)
HCO3_cotransp 476..968 CDD:279322 141/496 (28%)
abts-4NP_001024826.2 ae 81..955 CDD:273290 221/940 (24%)
Band_3_cyto 100..365 CDD:284893 46/299 (15%)
HCO3_cotransp 415..879 CDD:304903 141/491 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265068at2759
OrthoFinder 1 1.000 - - FOG0000136
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100185
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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