DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ndae1 and abts-3

DIOPT Version :9

Sequence 1:NP_723263.2 Gene:Ndae1 / 34005 FlyBaseID:FBgn0259111 Length:1190 Species:Drosophila melanogaster
Sequence 2:NP_001355414.1 Gene:abts-3 / 174024 WormBaseID:WBGene00019018 Length:1043 Species:Caenorhabditis elegans


Alignment Length:1145 Identity:263/1145 - (22%)
Similarity:446/1145 - (38%) Gaps:314/1145 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PWTMNSS-SGDDEAPKDPRTGGEDFTQQFTENDFEGHRAHTVYVGVHVPG-------GRRHSQ-- 65
            |.|:.:| ..||:.|..|     .|:...:.   .|.|..:|..|....|       .||.||  
 Worm    99 PGTVQTSGEEDDKVPPAP-----SFSLHLSP---VGTRRKSVQTGAPAIGFRPLKTFERRASQPT 155

  Fly    66 ----RRRKHHHSGPGGGGGGGGGGGSIGGSGSVGGGAGKDN----------VSEKQQEVERPVT- 115
                .::...:||...||..||....|..:.|.......|.          :|.|..:.|.|.| 
 Worm   156 LQFEAKKATMNSGTSSGGTAGGTVNLINTAQSTTISLPPDKAKMLTKRVSWLSMKSLQQEDPKTR 220

  Fly   116 -----------PPAQRV-----QFILGEDVDDGTHVSHPLFSEMGMLVKEGDEIEWKE------- 157
                       .|::.:     |..|.||.|..:. :.||           |.:.|..       
 Worm   221 RSSACGSPRGGSPSRTLSQYGSQPFLAEDRDFDSD-TPPL-----------DTLSWSNAGNEYDN 273

  Fly   158 -TARWIKFEE-DVEEGGNRWSKPHVATLSLHSLFELRRLLVNGSVMLDMEAQNL-EVMADLVCDH 219
             |..:.|.|: .:::.|:          .:.:..::..||....::||::..:| |:.|.::.:.
 Worm   274 VTLMYAKHEKIPMKDFGS----------EIRATMDIDHLLNKAVLLLDLQETSLEEIFAKIIHEM 328

  Fly   220 MVSAGTLPPGVKDKVKDALLRRHRHQHEYAKKTRLPIIRSLADMRNHSSSKKKKSNSKHSRPAQN 284
            .:..   |....::|:..|.                              .:...|..|      
 Worm   329 DIQE---PEFTSEQVRSVLF------------------------------TQDAGNQFH------ 354

  Fly   285 LSSITEDMVKSPSNQSMARPGSGTELSEQQHKGNTHFMRKIPPGAEASNILVGEVDFLERTLSCF 349
                    :.|.:.||:...||                            :.|..|: ::|..|.
 Worm   355 --------ILSRTVQSICTTGS----------------------------VGGSFDY-DQTWICA 382

  Fly   350 I--------------RLSQAVVLG----DLTEVPVPTRFVFILLGP---PGSQSNFHEIGRAMAT 393
            :              |||....||    ||       ||:.|::.|   .|:::.. |..|..||
 Worm   383 LCMLNTVQHRHVAIARLSHPTNLGRTMQDL-------RFIIIVIAPSRAKGTKTAL-ETTRTFAT 439

  Fly   394 LMSD-EIFHEVAYRARKRDHLLSGVDEFLDAVTVLPPGEWDPTIRIEPPAAIPSQEVRKRPPELP 457
            |.:| ||        |:|..:...|::|..  |:|...:         ..|:...:.|:|...:.
 Worm   440 LFADMEI--------RQRLVMAQSVEQFRS--TLLSAAK---------ELAMDQNQWRERKSSIH 485

  Fly   458 KEEVDEEEEEARLREENGLSRTGRLFG--------GLINDIKRKAPWYISDYKDALS-----MQC 509
            .....|:                 :||        ||:.:.||:...|.|||.|.:.     .:.
 Worm   486 LSHAKEQ-----------------IFGPEAWYPFRGLVEEFKRRLAIYPSDYLDGIRGHKTVQKL 533

  Fly   510 VASWIFLYFACLSPIITFGGLLAEATGKHMAAMESLVSGFVCGMGYGFFSGQPLTILGSTGPVLV 574
            .::.:|||||||.|.|.||.|..:.|...:...:.:::..:.|:.:..|.|||:.||.:|.|:.:
 Worm   534 FSTVVFLYFACLLPAIAFGVLNDDNTKGAINVRKVIIAQAIGGIFFSLFGGQPMIILLTTVPLAI 598

  Fly   575 FESIIYEFCLKMGWDYMTFRFWIGMWVAGICIVLTAIDASALVCYITRFTEENFATLIAFIFIYK 639
            :..:|::...::|:|::.....:|::.....|:.:|.:..:|:.:.||..||.|:..||..|   
 Worm   599 YIKVIFKISQELGYDFLAMYACVGLFCQMFLILYSATELCSLMKFATRSAEEMFSLFIAIAF--- 660

  Fly   640 AIENVMVIGKNFPVNQGIYDCVCTPPIGSNA--SVIDYAKYNWDSCESYNGTLVG----GDCGTP 698
            .:|::..|..:|..|..  || .|..|...|  :.::..| |..:.:|..|.:..    ||.|:.
 Worm   661 TVESIRAIHNSFKKNYN--DC-DTSAISMKAARTALNAFK-NGSNADSIVGNITSSMSIGDTGSL 721

  Fly   699 PTENVFLMSVVLCAGTFLISTVLKEFKNALFFPSIVRQYISDFSVLIAIFAMSF----------- 752
            ...:..::.::|..||..:...|..|:...:.....|::::|:::..::..|||           
 Worm   722 CRRDTSILYMLLMFGTLWLGLFLYNFRKTPYLTRSRREWLADYALPASVLIMSFTGSYAFSDIEK 786

  Fly   753 --FDYSLGVPTQKLEVPNELKPTLSTRGWLIPPFVEKNPWWSAIIAVFPALLG---TILIFMDQQ 812
              |:.....|..::.....|.|:    |:.:                 ..|||   :.|.|:||.
 Worm   787 DRFNLRFEFPLIQMADVTSLPPS----GYFV-----------------CLLLGFSLSFLFFIDQN 830

  Fly   813 ITAVIVNRKENKLKKGCGYHLDLFILSILIAICSMMGLPWFVAATVLSINHVNSL-KLESECSAP 876
            ||:.|||..:||||||..::||||::::|....|:.||||...|...|..|:.:| .:|...|..
 Worm   831 ITSAIVNNNQNKLKKGTSHNLDLFVVALLNMFLSVFGLPWMHGALPHSPLHLRALADVEERVSQG 895

  Fly   877 GEKPQFLGVREQRVTHILIFLTIGVSV-LLTPL-LGNIPMPVLFGVFLYMGVASLKGLQFFDRIL 939
            ......:.|||.|:..::..:.|.||: .|.|. |..||..||.|:||||.:.||.|.:.|:|:|
 Worm   896 HVHEVIMNVRETRLASLIAHVMILVSMFFLIPYPLQLIPTSVLHGLFLYMALTSLSGNEMFERLL 960

  Fly   940 IMFMPAKYQPDYMFLRQVPIKRVHLFTMIQLACLIILWLIKSFSQ---TSILFPLMLVVMIGIRK 1001
            ::....:..|...::|:||.::|||||..||..||||... .||.   ..::||::....:.||.
 Worm   961 LLITEQQAYPPTHYIRKVPQRKVHLFTACQLLQLIILCAF-GFSPYPFIEMVFPIVCFFFLPIRH 1024

  Fly  1002 ALDLVFTRRELKILDDIMPEMTKRAAADDLHKLDAEDNHH 1041
            .|               :|.:.      |...|||.|..|
 Worm  1025 TL---------------IPRLI------DYKYLDALDGRH 1043

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ndae1NP_723263.2 ae 140..1016 CDD:273290 217/948 (23%)
Band_3_cyto 167..435 CDD:284893 48/290 (17%)
HCO3_cotransp 476..968 CDD:279322 147/529 (28%)
abts-3NP_001355414.1 PtsN 298..459 CDD:224676 44/252 (17%)
HCO3_cotransp 499..989 CDD:366385 145/517 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265068at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1874
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.950

Return to query results.
Submit another query.