DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mEFG1 and MEF2

DIOPT Version :9

Sequence 1:NP_609105.1 Gene:mEFG1 / 34004 FlyBaseID:FBgn0263133 Length:745 Species:Drosophila melanogaster
Sequence 2:NP_012433.1 Gene:MEF2 / 853342 SGDID:S000003638 Length:819 Species:Saccharomyces cerevisiae


Alignment Length:805 Identity:230/805 - (28%)
Similarity:381/805 - (47%) Gaps:151/805 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 YSSHAKFSEHKPIERIRNIGISAHIDSGKTTLTERILFYTGRIAEMHEVRGKDNVGATMDSMELE 91
            |.|.|:    .|:.::|||||.||||:||||.|||:|:|.|....:.:|...|.:   .|.:|.|
Yeast    30 YLSTAR----SPLSKVRNIGIIAHIDAGKTTTTERMLYYAGISKHIGDVDTGDTI---TDFLEQE 87

  Fly    92 RQRGITIQSAATYTLWKDT-NINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVN 155
            |.|||||||||....|::| .||:||||||:|||.||.|||:|:|..|::|.||.||::||..|.
Yeast    88 RSRGITIQSAAISFPWRNTFAINLIDTPGHIDFTFEVIRALKVIDSCVVILDAVAGVEAQTEKVW 152

  Fly   156 RQMKRYNVPCLAFINKLDRLGSNPYRVLSQMRSKMNHNAA----------FIQLPIGVESNCKGI 210
            :|.|  :.|.:.||||:||:|::....::.:.:|......          :.:.|...:...:|:
Yeast   153 KQSK--SKPKICFINKMDRMGASFNHTVNDLINKFMRGTTTKPVLVNIPYYRKQPTSNDYVFQGV 215

  Fly   211 VDLVREKAIYFEGEHGMDIRLDEIPQDMRVESLER-RQELIEHLSNADETLGELFLEEKPFTEDD 274
            :|:|..|.:.:..|:..:|.:||: ....:|...| |:.:||.|:..||.|.:.||||   .|.|
Yeast   216 IDVVNGKRLTWNPENPDEIIVDEL-DGTSLEQCNRCRESMIETLTEYDEDLVQHFLEE---AEGD 276

  Fly   275 --------IKAALRRTCINRTFTPVLVGTALKNKGVQPLLDAVLDYLPNPGEVENLGFIEKE--- 328
                    :.|::|:..:.....|||.|.:.||.||||||||:::|||:|.|.|.....:|.   
Yeast   277 YSKVSAQFLNASIRKLTMKNMIVPVLCGASFKNIGVQPLLDAIVNYLPSPIEAELPELNDKTVPM 341

  Fly   329 GQDPEKVVLNPARDGKDPFVGLAFKLEAGRF-GQLTYLRCYQGVLRKGDNIFNARTNKKVRIARL 392
            ..||:...|  ..:.|:..:.||||:..... |:..::|.|.|.|..|:.::|:.|.:|.::.:|
Yeast   342 KYDPKVGCL--VNNNKNLCIALAFKVITDPIRGKQIFIRIYSGTLNSGNTVYNSTTGEKFKLGKL 404

  Fly   393 VRLHSNQMEDVNEVYAGDIFALFGV----DCASGDTFTTNPKN-------------NLSMESIFV 440
            :..|:...:.||.:.||.|..|.|.    :.::|||..|:...             .|.:.|||:
Yeast   405 LIPHAGTSQPVNILTAGQIGLLTGSTVENNISTGDTLITHSSKKDGLKSLDKKKELTLKINSIFI 469

  Fly   441 PEPVVSMAIKPNNTKDRDNFSKAIARFTKEDPTFHFFFDNDVKETLVSGMGELHLEIYAQRMERE 505
            |.||..::|:|....::.:..:|:.....|||:.....:::..:|:::|||||||||...|:..:
Yeast   470 PPPVFGVSIEPRTLSNKKSMEEALNTLITEDPSLSISQNDETGQTVLNGMGELHLEIAKDRLVND 534

  Fly   506 YGCPVTLGKPKVAFRETLVGPCEFDYLHKKQSGGSGQYARIIGVME-----------PLPPNQNT 559
            ....|..|:..|:::||:......: .::...|    |...:.::.           ||..|:|.
Yeast   535 LKADVEFGQLMVSYKETINSETNIE-TYESDDG----YRFSLSLLPNSDALPNCLAYPLGVNENF 594

  Fly   560 LL-------------EFVDETVGTNVPKQFVPGVEKGYREMAEKGMLSGHKLSGIRFRLQ----- 606
            |:             :...|::..::....:.|:::|       |.::...|.....::.     
Yeast   595 LIMEKNGNWDKEWKYQVSFESILNSIIASCIVGLQRG-------GKIANFPLYACSIKINSDWSV 652

  Fly   607 ----DGGHHIVDSSELAFMLAAHGAIKEVFQNGSWQILEPIMLVEVTAPEEFQGAVMGHLS-KRH 666
                :....|:..:......|.:....|     .:.:|||||.:::|.|:...|.|:..|: .|.
Yeast   653 PPDIETPQEILKITRNLIFKALNDLKPE-----KYNLLEPIMNLDLTIPQSDVGTVLQDLTGARK 712

  Fly   667 GIITGTE-----GTEGWFT---------------------------------------VYAEVPL 687
            ..|...|     ...|..|                                       :.|:|||
Yeast   713 AQILSIEDESSVSNSGASTCNSPENSNRIYIPSDAVTTLHATKDKKNTQETSSNVKKIIKAKVPL 777

  Fly   688 NDMFGYAGELRSSTQGKGEFTMEYS 712
            .::..|..:|||.:||:|||.:|||
Yeast   778 REITTYTNKLRSLSQGRGEFNIEYS 802

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFG1NP_609105.1 EF-G 44..316 CDD:206673 116/291 (40%)
PRK12740 48..727 CDD:237186 221/784 (28%)
mtEFG1_II_like 347..427 CDD:293908 25/84 (30%)
EFG_III 441..516 CDD:293919 22/74 (30%)
EFG_mtEFG1_IV 519..636 CDD:238715 17/149 (11%)
mtEFG1_C 641..718 CDD:239764 30/117 (26%)
MEF2NP_012433.1 FusA 37..817 CDD:223556 227/794 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0480
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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