DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mEFG1 and EFT2

DIOPT Version :9

Sequence 1:NP_609105.1 Gene:mEFG1 / 34004 FlyBaseID:FBgn0263133 Length:745 Species:Drosophila melanogaster
Sequence 2:NP_010673.1 Gene:EFT2 / 851993 SGDID:S000002793 Length:842 Species:Saccharomyces cerevisiae


Alignment Length:862 Identity:212/862 - (24%)
Similarity:343/862 - (39%) Gaps:210/862 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 IERIRNIGISAHIDSGKTTLTERILFYTGRI--AEMHEVRGKDNVGATMDSMELERQRGITIQSA 101
            :..:||:.:.||:|.||:|||:.::...|.|  |:..|.|       ..|:.:.|::|||||:|.
Yeast    16 VTNVRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEAR-------FTDTRKDEQERGITIKST 73

  Fly   102 A--TYTLWKDTN--------------INIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQ 150
            |  .|:...|.:              ||:||:||||||:.||..||||.|||::|:..:.||..|
Yeast    74 AISLYSEMSDEDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQ 138

  Fly   151 TLTVNRQMKRYNVPCLAFINKLDRLGSNPYRVLSQMRSKMNHNAAFIQLPIGVESNCKGIVDLV- 214
            |.||.||.....:..:..|||:||      .:|....||.:....|.:....|........|.| 
Yeast   139 TETVLRQALGERIKPVVVINKVDR------ALLELQVSKEDLYQTFARTVESVNVIVSTYADEVL 197

  Fly   215 --------REKAIYFEGEHGMDIRLDEIPQDMRVESLERRQELIEHLSNADETLGELFL--EEKP 269
                    |....:..|.||....:.:.      .:...::..::.....|...|:.|.  :.|.
Yeast   198 GDVQVYPARGTVAFGSGLHGWAFTIRQF------ATRYAKKFGVDKAKMMDRLWGDSFFNPKTKK 256

  Fly   270 FTEDDIKA---ALRRTC-------INRTFT----------PVLV---------------GTALKN 299
            :|..|..|   .|.|..       |.|.||          |||:               |.||..
Yeast   257 WTNKDTDAEGKPLERAFNMFILDPIFRLFTAIMNFKKDEIPVLLEKLEIVLKGDEKDLEGKALLK 321

  Fly   300 ---KGVQPLLDAVLD----YLPNPGEVENLGFIEKEGQDPEKVVLNPARDGK-------DPFVGL 350
               :...|..||:|:    :||:|        :..:....|::...||.|..       ||...|
Yeast   322 VVMRKFLPAADALLEMIVLHLPSP--------VTAQAYRAEQLYEGPADDANCIAIKNCDPKADL 378

  Fly   351 AFKL-------EAGRFGQLTYLRCYQGVLRKGDNIF----NARTNKK-----VRIARLVRLHSNQ 399
            ...:       :.|||  ..:.|.:.|.::.|..:.    |....||     ..|.|:|.:....
Yeast   379 MLYVSKMVPTSDKGRF--YAFGRVFAGTVKSGQKVRIQGPNYVPGKKDDLFIKAIQRVVLMMGRF 441

  Fly   400 MEDVNEVYAGDIFALFGVD---CASGDTFTTNPKNNLSMESIFVPEPVVSMAIKPNNTKDRDNFS 461
            :|.:::..||:|..|.|:|   ..:|...|:...:|:.:.. |...|||.:|::..|..|.....
Yeast   442 VEPIDDCPAGNIIGLVGIDQFLLKTGTLTTSETAHNMKVMK-FSVSPVVQVAVEVKNANDLPKLV 505

  Fly   462 KAIARFTKEDPTFHFFFDNDVKETLVSGMGELHLEIYAQRMEREY-GCPVTLGKPKVAFRETLVG 525
            :.:.|.:|.||.. ..:.::..|.:|:|.|||||||..|.:|.:: |.|:.:..|.||:|||:  
Yeast   506 EGLKRLSKSDPCV-LTYMSESGEHIVAGTGELHLEICLQDLEHDHAGVPLKISPPVVAYRETV-- 567

  Fly   526 PCEFDYLHKKQSGGSGQYARIIGVMEPLPPNQNTLLE---------------------------- 562
              |.:......|....::.||....||:....:..:|                            
Yeast   568 --ESESSQTALSKSPNKHNRIYLKAEPIDEEVSLAIENGIINPRDDFKARARIMADDYGWDVTDA 630

  Fly   563 ---------------FVDETVGTNVPKQFVPGVEKGYREMAEKGMLSGHKLSGIRFRLQD----- 607
                           .:|:|.......:....|...::...::|.:.|.::..:|..:.|     
Yeast   631 RKIWCFGPDGNGPNLVIDQTKAVQYLHEIKDSVVAAFQWATKEGPIFGEEMRSVRVNILDVTLHA 695

  Fly   608 -----GGHHIVDSSELA----FMLAAHGAIKEVFQNGSWQILEPIMLVEVTAPEEFQGAVMGHLS 663
                 ||..|:.:...|    |:||            ..:|.||:.|||:..||:..|.:...|:
Yeast   696 DAIHRGGGQIIPTMRRATYAGFLLA------------DPKIQEPVFLVEIQCPEQAVGGIYSVLN 748

  Fly   664 KRHGIITGTEGTEG--WFTVYAEVPLNDMFGYAGELRSSTQGKGEFTMEYSRYSPCLPDVQD--- 723
            |:.|.:...|...|  .|||.|.:|:|:.||:.||||.:|.|:....|.:..:|....|..|   
Yeast   749 KKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWSTLGSDPLDPTS 813

  Fly   724 ---QIVRQYQESQGLAQ 737
               :||...::..|:.:
Yeast   814 KAGEIVLAARKRHGMKE 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFG1NP_609105.1 EF-G 44..316 CDD:206673 94/342 (27%)
PRK12740 48..727 CDD:237186 208/841 (25%)
mtEFG1_II_like 347..427 CDD:293908 21/98 (21%)
EFG_III 441..516 CDD:293919 24/75 (32%)
EFG_mtEFG1_IV 519..636 CDD:238715 24/173 (14%)
mtEFG1_C 641..718 CDD:239764 29/78 (37%)
EFT2NP_010673.1 PTZ00416 1..842 CDD:240409 212/862 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0480
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.