DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mEFG1 and gfm1

DIOPT Version :9

Sequence 1:NP_609105.1 Gene:mEFG1 / 34004 FlyBaseID:FBgn0263133 Length:745 Species:Drosophila melanogaster
Sequence 2:NP_001073463.1 Gene:gfm1 / 561840 ZFINID:ZDB-GENE-061013-79 Length:745 Species:Danio rerio


Alignment Length:742 Identity:478/742 - (64%)
Similarity:588/742 - (79%) Gaps:12/742 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LRALKSLGKAGYSSHAKFSE-----------HKPIERIRNIGISAHIDSGKTTLTERILFYTGRI 69
            |||..||.:.....|:...:           ..|.||||||||||||||||||||||:|:|||||
Zfish     4 LRAASSLARLHRPGHSTLQQVLISCRSCSNGITPNERIRNIGISAHIDSGKTTLTERVLYYTGRI 68

  Fly    70 AEMHEVRGKDNVGATMDSMELERQRGITIQSAATYTLWKDTNINIIDTPGHVDFTVEVERALRVL 134
            ||||||||||.|||.|||||||||||||||||||||:||:.||||||||||||||:||||:||||
Zfish    69 AEMHEVRGKDGVGAIMDSMELERQRGITIQSAATYTMWKNHNINIIDTPGHVDFTIEVERSLRVL 133

  Fly   135 DGAVLVLCAVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRLGSNPYRVLSQMRSKMNHNAAFIQL 199
            ||||||||||||||.||:|||||||||:||.|.|||||||||:||.|.|.|:|:|:|.||||:.:
Zfish   134 DGAVLVLCAVGGVQCQTVTVNRQMKRYSVPFLTFINKLDRLGANPNRALQQLRTKLNQNAAFVNI 198

  Fly   200 PIGVESNCKGIVDLVREKAIYFEGEHGMDIRLDEIPQDMRVESLERRQELIEHLSNADETLGELF 264
            |||:|.|.:||:||:.|::|.|:|..|..:|.::||.:||.|:.:|||||:|.::||||||||:|
Zfish   199 PIGLEGNLRGIIDLIEERSIVFDGPFGESVRYEDIPPEMRSEAADRRQELVECVANADETLGEMF 263

  Fly   265 LEEKPFTEDDIKAALRRTCINRTFTPVLVGTALKNKGVQPLLDAVLDYLPNPGEVENLGFIEKEG 329
            |||:..|..|:|||:||..:.|:|:|||||:|||||||||||||||:|||||.||:|...:.:||
Zfish   264 LEERVPTVLDLKAAVRRATVKRSFSPVLVGSALKNKGVQPLLDAVLEYLPNPTEVQNYAILNEEG 328

  Fly   330 Q-DPEKVVLNPARDGKDPFVGLAFKLEAGRFGQLTYLRCYQGVLRKGDNIFNARTNKKVRIARLV 393
            : :..|::::..||...|||||||||||||||||||:|.|||.|||.|.|.|:||.::||:.|||
Zfish   329 ESEGSKILMDSTRDDTQPFVGLAFKLEAGRFGQLTYVRVYQGCLRKTDYIHNSRTGRRVRVQRLV 393

  Fly   394 RLHSNQMEDVNEVYAGDIFALFGVDCASGDTFTTNPKNNLSMESIFVPEPVVSMAIKPNNTKDRD 458
            |||::|||||...|||||.||||:|||||||||.....|||||||.|||||:||||:|:|..|.|
Zfish   394 RLHADQMEDVEVAYAGDICALFGIDCASGDTFTARNNANLSMESIHVPEPVISMAIRPSNKNDTD 458

  Fly   459 NFSKAIARFTKEDPTFHFFFDNDVKETLVSGMGELHLEIYAQRMEREYGCPVTLGKPKVAFRETL 523
            ..||.|:|||:|||||...||.:.|||::|||||||||||:|||||||.||..:|||||||||||
Zfish   459 KLSKGISRFTREDPTFRVHFDTESKETIISGMGELHLEIYSQRMEREYSCPCVMGKPKVAFRETL 523

  Fly   524 VGPCEFDYLHKKQSGGSGQYARIIGVMEPLPPNQNTLLEFVDETVGTNVPKQFVPGVEKGYREMA 588
            .....|:|.|||||||||||.::|||:|||.....|.:||.|||||||:||||||.||||:|:..
Zfish   524 TSAVPFEYTHKKQSGGSGQYGKVIGVLEPLDSENYTKVEFSDETVGTNIPKQFVPAVEKGFRDAC 588

  Fly   589 EKGMLSGHKLSGIRFRLQDGGHHIVDSSELAFMLAAHGAIKEVFQNGSWQILEPIMLVEVTAPEE 653
            |||.|.|||:||:||.|:||.||:|||:|::|:.|..||:|:..:..:..||||:|.||:.||.|
Zfish   589 EKGPLIGHKISGVRFVLEDGAHHMVDSNEISFIRAGEGAVKQALEKATVVILEPVMSVEIVAPNE 653

  Fly   654 FQGAVMGHLSKRHGIITGTEGTEGWFTVYAEVPLNDMFGYAGELRSSTQGKGEFTMEYSRYSPCL 718
            |||||:..:::|||:|:|.:|.:|:||:||::|||||||||.||||.|:||||:|||||||.||.
Zfish   654 FQGAVIAGVNRRHGVISGQDGADGYFTLYADIPLNDMFGYATELRSCTEGKGEYTMEYSRYQPCA 718

  Fly   719 PDVQDQIVRQYQESQGLAQPDKKKKKN 745
            ..||:.:|.::.|:.|.....|.|.||
Zfish   719 ASVQEDLVNKHLEATGQLPAKKSKWKN 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFG1NP_609105.1 EF-G 44..316 CDD:206673 201/271 (74%)
PRK12740 48..727 CDD:237186 456/679 (67%)
mtEFG1_II_like 347..427 CDD:293908 60/79 (76%)
EFG_III 441..516 CDD:293919 50/74 (68%)
EFG_mtEFG1_IV 519..636 CDD:238715 70/116 (60%)
mtEFG1_C 641..718 CDD:239764 50/76 (66%)
gfm1NP_001073463.1 EF-G 43..315 CDD:206673 201/271 (74%)
PRK12740 47..726 CDD:237186 456/678 (67%)
mtEFG1_II_like 347..427 CDD:293908 60/79 (76%)
EFG_III 441..516 CDD:293919 50/74 (68%)
EFG_mtEFG1_IV 519..635 CDD:238715 70/115 (61%)
mtEFG1_C 641..718 CDD:239764 50/76 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582919
Domainoid 1 1.000 419 1.000 Domainoid score I621
eggNOG 1 0.900 - - E1_COG0480
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6449
Inparanoid 1 1.050 979 1.000 Inparanoid score I296
OMA 1 1.010 - - QHG62898
OrthoDB 1 1.010 - - D220174at33208
OrthoFinder 1 1.000 - - FOG0003241
OrthoInspector 1 1.000 - - oto41259
orthoMCL 1 0.900 - - OOG6_100770
Panther 1 1.100 - - LDO PTHR43636
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R368
SonicParanoid 1 1.000 - - X2192
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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