DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mEFG1 and eef2.2

DIOPT Version :9

Sequence 1:NP_609105.1 Gene:mEFG1 / 34004 FlyBaseID:FBgn0263133 Length:745 Species:Drosophila melanogaster
Sequence 2:NP_001015785.1 Gene:eef2.2 / 548502 XenbaseID:XB-GENE-5771153 Length:859 Species:Xenopus tropicalis


Alignment Length:858 Identity:217/858 - (25%)
Similarity:347/858 - (40%) Gaps:191/858 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 IRNIGISAHIDSGKTTLTERILFYTGRIAEMHEVRGKDNVGAT--MDSMELERQRGITIQSAATY 104
            |||:.:.||:|.||:|||:.::...|.||..       ..|.|  .|:.:.|::|.|||:|.| .
 Frog    19 IRNMSVIAHVDHGKSTLTDSLVCKAGIIASA-------RAGETRFTDTRKDEQERCITIKSTA-I 75

  Fly   105 TLWKDTN-----------------INIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTL 152
            :|:.:.:                 ||:||:||||||:.||..||||.|||::|:..|.||..||.
 Frog    76 SLYYELSENDLAFIKQCKEGSGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTE 140

  Fly   153 TVNRQMKRYNVPCLAFINKLDR----LGSNPYRV-LSQMRSKMNHNAAFIQLPIGVESNCKG--I 210
            ||.||.....:..:..:||:||    |...|..: |:..|...|.|........| ||...|  :
 Frog   141 TVLRQAIAERIKPVLMMNKMDRALLELQLEPEELYLTFQRIVENVNVIISTYGEG-ESGPMGNIM 204

  Fly   211 VDLVREKAIYFEGEHGMDIRLDEIPQDMRVESLERRQELIEHLSNAD-----ETLGELFLEEKPF 270
            :|.|.....:..|.||....|.:. .:|.|.....:.|..: |:.||     |.:.:....:|.|
 Frog   205 IDPVIGTVGFGSGLHGWAFTLKQF-AEMYVAKFASKGEKTK-LNPADRAKKVEDMMKKLWGDKYF 267

  Fly   271 TEDDIKAALRRTCIN-------RTFTPVL-----------------------------VGTALKN 299
              |.......:|..|       |||:.::                             :.|..|.
 Frog   268 --DPSTGKFSKTATNAEGKKLPRTFSQLILDPIFKIFDAIMNFKKEETAKLIEKLDIKLDTEDKE 330

  Fly   300 KGVQPLLDAVLD---------------YLPNPGEVENLGF-IEKEGQDPEKVVLN-PARDGKDPF 347
            |..:|||.||:.               :||:|...:.... :..||...::..|. .:.|.|.|.
 Frog   331 KEGKPLLKAVMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPPDDEAALGVKSCDPKGPL 395

  Fly   348 VGLAFKL----EAGRFGQLTYLRCYQGVLRKGDNIF----NARTNKK-----VRIARLVRLHSNQ 399
            |....|:    :.|||  ..:.|.:.|::..|..:.    |....||     ..|.|.:.:....
 Frog   396 VMYISKMVPTSDKGRF--YAFGRVFSGIVSTGQKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRY 458

  Fly   400 MEDVNEVYAGDIFALFGVD---CASGDTFTTNPKNNLSMESIFVPEPVVSMAIKPNNTKDRDNFS 461
            :|.:.:|..|:|..|.|||   ..:|...|....:|:.:.. |...|||.:|::..|..|.....
 Frog   459 VEPIEDVPCGNIVGLVGVDQFLVKTGTITTFEHAHNMRVMK-FSVSPVVRVAVEAKNPADLPKLV 522

  Fly   462 KAIARFTKEDPTFHFFFDNDVKETLVSGMGELHLEIYAQRMEREYGC-PVTLGKPKVAFRETL-- 523
            :.:.|..|.||......: :..|.:::|.|||||||..:.:|.::.| |:....|.|::|||:  
 Frog   523 EGLKRLAKSDPMVQCIIE-ESGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETVSE 586

  Fly   524 --------VGPCEFD---------------------------------YLHKKQSGGSGQYARII 547
                    ..|.:.:                                 ||.:|......: ||.|
 Frog   587 ESSQLCLSKSPNKHNRLFMKARPFPDGLAEDIDKGDVSSRQELKQRARYLAEKYEWDVAE-ARKI 650

  Fly   548 GVMEPLPPNQNTLLEFVDETVGTNVPKQFVPGVEKGYREMAEKGMLSGHKLSGIRFRLQD----- 607
            ....|.....|.|   ||.|.|.....:....|..|::...::|:|....|.|.||.:.|     
 Frog   651 WCFGPDGTGPNIL---VDVTKGVQYLNEIKDSVVAGFQWATKEGVLCEENLRGARFDIHDVTLHA 712

  Fly   608 -----GGHHIVDSSELAFMLAAHGAIKEVFQNGSWQILEPIMLVEVTAPEEFQGAVMGHLSKRHG 667
                 ||..|:.::......:|..|        ..:::|||.|||:..||:..|.:.|.|:::.|
 Frog   713 DAIHRGGGQIIPTARRVLYASALTA--------QPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRG 769

  Fly   668 IITGTEGTEG--WFTVYAEVPLNDMFGYAGELRSSTQGKG--EFTMEYSRYSPCLP----DVQDQ 724
            .:.......|  .|.|.|.:|:|:.||:..:|||:|.|:.  :...::.:..|..|    ....|
 Frog   770 HVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDSTSRPSQ 834

  Fly   725 IVRQYQESQGLAQ 737
            :|.:.::.:||.:
 Frog   835 VVGETRKRKGLKE 847

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFG1NP_609105.1 EF-G 44..316 CDD:206673 97/353 (27%)
PRK12740 48..727 CDD:237186 211/840 (25%)
mtEFG1_II_like 347..427 CDD:293908 22/95 (23%)
EFG_III 441..516 CDD:293919 22/75 (29%)
EFG_mtEFG1_IV 519..636 CDD:238715 31/169 (18%)
mtEFG1_C 641..718 CDD:239764 26/80 (33%)
eef2.2NP_001015785.1 PTZ00416 1..859 CDD:240409 217/858 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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