DRSC/TRiP Functional Genomics Resources

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Protein Alignment mEFG1 and eEF1alpha2

DIOPT Version :9

Sequence 1:NP_609105.1 Gene:mEFG1 / 34004 FlyBaseID:FBgn0263133 Length:745 Species:Drosophila melanogaster
Sequence 2:NP_524611.1 Gene:eEF1alpha2 / 43736 FlyBaseID:FBgn0000557 Length:462 Species:Drosophila melanogaster


Alignment Length:531 Identity:117/531 - (22%)
Similarity:196/531 - (36%) Gaps:177/531 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 ERIR-NIGISAHIDSGKTTLTERILFYTGRI---------AEMHEV-RGKDNVGATMDSMELERQ 93
            |:|. ||.:..|:||||:|.|..:::..|.|         .|..|: :|.......:|.::.||:
  Fly     4 EKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68

  Fly    94 RGITIQSAATYTLWK-DTN---INIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTV 154
            |||||..|    ||| :|:   :.|||.|||.||...:.......|.|||::.|..|.....::.
  Fly    69 RGITIDIA----LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 129

  Fly   155 NRQMKRYNVPCLAF----------INKLDRLGSNPY---------RVLSQMRSKMNHNAAFIQ-L 199
            |.|.:.:.:  |||          :||:|.. ..||         :.:|....|:.:|.|.:. :
  Fly   130 NGQTREHAL--LAFTLGVKQLIVGVNKMDST-EPPYSEARYEEIKKEVSSYIKKIGYNPASVAFV 191

  Fly   200 PIG-------VESNCKGIVDLVREKAIYFEGEHGMDIRLDEIPQDMRVESLERRQE---LIEHLS 254
            ||.       :|.:         ||..:|:|              ..||..|.:.|   ||:.| 
  Fly   192 PISGWHGDNMLEPS---------EKMPWFKG--------------WSVERKEGKAEGKCLIDAL- 232

  Fly   255 NADETLGELFLEEKPF---TED-------------DIKAALRRTCINRTFTPVLVGTALKNKGVQ 303
              |..|......:||.   .:|             .::..|.:..:...|.||.:.|.:|:  |:
  Fly   233 --DAILPPQRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGLLKPGMVVNFAPVNLVTEVKS--VE 293

  Fly   304 PLLDAVLDYLP--NPG-EVENL-------GFIEKEGQDPEKVVLNPARDGKDPFVGLAFKLEAGR 358
            ...:|:.:.:|  |.| .|:|:       |::..:.::      ||.|...|             
  Fly   294 MHHEALTEAMPGDNVGFNVKNVSVKELRRGYVAGDSKN------NPPRGAAD------------- 339

  Fly   359 FGQLTYLRCYQGVLRKGDNIFNARTNKKVRIARLVRLHSNQMED----VNEVYAGDIFALFG--- 416
                                |.|:.        :|..|..|:.:    |.:.:...|...|.   
  Fly   340 --------------------FTAQV--------IVLNHPGQIANGYTPVLDCHTAHIACKFSEIK 376

  Fly   417 --VDCASGDTFTTNPKNNLSMESIFVPEPVVSMAIKPNNTKDRDNFSKAIARFTKEDPTFHFFFD 479
              .|..:|.|..|.||...|.::..:       .:.|:.....::|        :|.|....|..
  Fly   377 EKCDRRTGKTTETEPKAIKSGDAAII-------VLVPSKPLCVESF--------QEFPPLGRFAV 426

  Fly   480 NDVKETLVSGM 490
            .|:::|:..|:
  Fly   427 RDMRQTVAVGV 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFG1NP_609105.1 EF-G 44..316 CDD:206673 83/333 (25%)
PRK12740 48..727 CDD:237186 113/522 (22%)
mtEFG1_II_like 347..427 CDD:293908 11/88 (13%)
EFG_III 441..516 CDD:293919 8/50 (16%)
EFG_mtEFG1_IV 519..636 CDD:238715
mtEFG1_C 641..718 CDD:239764
eEF1alpha2NP_524611.1 PTZ00141 1..450 CDD:185474 117/531 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464626
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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