DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mEFG1 and CG2017

DIOPT Version :10

Sequence 1:NP_609105.1 Gene:mEFG1 / 34004 FlyBaseID:FBgn0263133 Length:745 Species:Drosophila melanogaster
Sequence 2:NP_649603.3 Gene:CG2017 / 40733 FlyBaseID:FBgn0037391 Length:643 Species:Drosophila melanogaster


Alignment Length:667 Identity:136/667 - (20%)
Similarity:213/667 - (31%) Gaps:247/667 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LIT----RLLTGNNTLRLRALKSLG--KAGY-------SSHAKFSEHKPIERIRNIGISAHIDSG 54
            |:|    ||..||.    .|:..:|  .|||       ..:|..:..|  :...::|.|..:...
  Fly   132 LVTQMKWRLREGNG----EAIYEIGVSDAGYLQGLSDKDMNASLTTLK--QMAHSLGASTSVLRR 190

  Fly    55 KTTLTERILFYTGRIAEM---------H--EVR---------GKDNVGATMDSMELERQRGIT-- 97
            ||....|      .:||:         |  |||         ||..:...:...||:...|..  
  Fly   191 KTIAARR------AVAEVLVRKIPDDQHNIEVRVAVLGGADAGKSTLLGVLTQDELDNGHGRARL 249

  Fly    98 --------IQSAAT-----YTLWKDTNINIIDTPGHVDFTVE--VERALRVLDGAVLVLCAVGGV 147
                    |||..|     .||..|...|:::...:...|.|  .:|:.::             |
  Fly   250 NMFRHMHEIQSGRTSCISHETLGFDALGNVVNYKYNEMMTAEEISDRSSKL-------------V 301

  Fly   148 QSQTLTVNRQMKRYNVPCLAFINKLDRLGSNPYRVLSQMRSKMNHNAAFIQLPIGVESNCKGIVD 212
            ....|..:|:..|..|..|:        |.:|:               :..|.:...|.|....:
  Fly   302 TFMDLAGHRRYMRTTVQALS--------GYSPH---------------YAMLVVSAGSGCNDTTE 343

  Fly   213 LVREKAIYFEGEHGMDIRLDEIPQDMRV--ESLERRQELIEHLSNADETLGELFLEEKPF----T 271
                       ||...:|..::|..:.|  ..:......::.|.|...|:|   ..:.||    |
  Fly   344 -----------EHLAIVRALDMPFFVLVTKTDITSPDATVQELCNLLTTIG---CRKVPFVVTNT 394

  Fly   272 EDDIKAALRRTCINRTFTPV-----LVGTALKNKGVQPLLDAVLDYLPNPGEVENLGFIEKEGQD 331
            ::.|.|...:  |:....|:     :.||.|.      |:...| |:.:|| :.|   .||:..:
  Fly   395 DEAISAGSNQ--ISENIVPIFCVSNVTGTGLN------LVTKFL-YVLSPG-ISN---AEKDRLE 446

  Fly   332 PEKVVLNPARDGKDPFVGLAFKLEAGRFGQLTYLRCYQGVLRKGDNIFNARTNKKVRIARLVRLH 396
            .|.                                |...|    |.||                 
  Fly   447 QES--------------------------------CEFQV----DEIF----------------- 458

  Fly   397 SNQMEDVNEVYAGDIFALFGVDCASGDTFTTNPKNNLSMESIFVPE----PVVSMAIKPNNTKDR 457
              ::.||..|..|  ..:.||           ...|::|:...:|:    ||....|..|     
  Fly   459 --RVSDVGPVVGG--LLVQGV-----------LTENMAMKIGPLPDGSFHPVTVNTIHRN----- 503

  Fly   458 DNFSKAIARFTK--EDPTFHFFFDNDVKETLVSGM---GELHLEIYAQRMEREYGCPVTLGKPKV 517
                ||..|..:  :..:..|..|.|| .||.|||   |::     ...::..||......|..|
  Fly   504 ----KAPCRVVRAGQSASLSFSMDQDV-PTLRSGMVLLGDI-----GNSLDEPYGTFFFQAKVSV 558

  Fly   518 AFRETLVGPCEFDYLHKKQS---GGSGQYARIIGVM--EPLPPNQ--NTLLEFVDETVGTNVPKQ 575
            .|..|.:      |:..:.:   |...|.|.|.|:|  |.|..|.  :.:.|||..      |:.
  Fly   559 LFHATAI------YVGFQTTVHIGSIRQTAVIRGIMGGERLGTNDCASVMFEFVGH------PEY 611

  Fly   576 FVPGVEKGYREMAEKGM 592
            ..||:...:||...||:
  Fly   612 VRPGMRILFREGTSKGI 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFG1NP_609105.1 FusA 38..731 CDD:440248 123/619 (20%)
CG2017NP_649603.3 GTPBP1_like 217..436 CDD:206728 50/277 (18%)
GTPBP_II 450..536 CDD:293895 30/131 (23%)
GTPBP_III 547..634 CDD:294007 26/94 (28%)

Return to query results.
Submit another query.