DRSC/TRiP Functional Genomics Resources

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Protein Alignment mEFG1 and waw

DIOPT Version :9

Sequence 1:NP_609105.1 Gene:mEFG1 / 34004 FlyBaseID:FBgn0263133 Length:745 Species:Drosophila melanogaster
Sequence 2:NP_001027089.1 Gene:waw / 3771960 FlyBaseID:FBgn0024182 Length:696 Species:Drosophila melanogaster


Alignment Length:740 Identity:161/740 - (21%)
Similarity:267/740 - (36%) Gaps:248/740 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SLITRLLTGNNTLRLRALKSLGKAGYSSHA----KFSEHKPIERIRNIGISAHIDSGKTTLTERI 62
            ||:.|.|:..|.::       |:....|.|    :|: |.|:|||||..|.||:|.||:||.:|:
  Fly    63 SLLVRNLSTTNQVK-------GETEEPSQADLLREFA-HMPVERIRNFSIIAHVDHGKSTLADRL 119

  Fly    63 LFYTGRIAE---MHEVRGKDNVGATMDSMELERQRGITI--QSAATYTLWKDT--NINIIDTPGH 120
            |..||.||.   .|:|         :|::::||:||||:  |:|:.:...|..  .:|:||||||
  Fly   120 LELTGAIARNGGQHQV---------LDNLQVERERGITVKAQTASIFHRHKGQLYLLNLIDTPGH 175

  Fly   121 VDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRLGSNPYRVLSQ 185
            |||:.||.|:|...||.||::.|..|||:||:......|:..:..:..:||:|...:||.:|...
  Fly   176 VDFSNEVSRSLAACDGVVLLVDACHGVQAQTVANYHLAKQRQLAVVPVLNKIDIKHANPDQVCQD 240

  Fly   186 MRSKMNHNAAFIQLPIGVESNCKGIVDLVREKAIYFEGEHGMDIRLDEIPQDMRVESLERRQELI 250
            ::           |..|::.                          ||:   :||.:        
  Fly   241 LK-----------LLFGIDP--------------------------DEV---LRVSA-------- 257

  Fly   251 EHLSNADETLGELFLEEKPFTEDDIKAALRRTCINRTFTPVLVGTALKNKGVQPLLDAVLDYLPN 315
                                                     .:||     ||..:|:.|::.:| 
  Fly   258 -----------------------------------------KLGT-----GVSEVLERVIETVP- 275

  Fly   316 PGEVENLGFIEKEGQDPEKVVLNPARDGKDPFVGLAFKLEAGRF-GQLTYLRCYQGVLRKGDNIF 379
            |.:|:                    ||  ..|..|.|.....:: |.|..:....|.|.:..:|.
  Fly   276 PPQVQ--------------------RD--SDFRALIFDSWFDKYRGALNLIYVLNGKLEQNQDIQ 318

  Fly   380 NARTNKKVRIARLVRLHSNQMEDVNEVYAGDIFALFGVDCAS------GDTFTTNPKNNLSMESI 438
            :..|.|...:..:..|...:. .|.:|.||.: .|...:..:      |||.....:...:..|.
  Fly   319 SLATKKVYSVKSISVLRPAEC-PVPDVSAGQV-GLIACNMRNSKESIVGDTIHLKNQAVAAAGSY 381

  Fly   439 FVPEPVVSMAIKPNNTKDRDNFSKAIARFTKEDPTFHFFFDNDVKETLVSG-----MGELHLEIY 498
            ...:|:|...:.|.:.........||.:....|.......|:  ...|..|     :|.||:|::
  Fly   382 RPQQPLVFAGVFPADQSKHVALRSAIDKMVLNDSAVTVKIDS--SPALGQGWRLGFLGLLHMEVF 444

  Fly   499 AQRMEREYGCPVTLGKPKVAFRETLVGPCEFDYLHKKQSGGSGQYARIIGVMEPLPPNQNTLLEF 563
            .||:|:|:|....:..|.|.:|..|..|                                     
  Fly   445 CQRLEQEHGAEPIITAPSVTYRLVLSNP------------------------------------- 472

  Fly   564 VDETVGTNVPKQFVPGVEKGYREMAEKGMLSGHKLSGIRFRLQDGGHHIVDSSELAFMLAAHGAI 628
                                             |:      ::..|...:|.|..|.....| :|
  Fly   473 ---------------------------------KM------IKQQGRDTMDISNAALFPEPH-SI 497

  Fly   629 KEVFQNGSWQILEPIMLVEVTAPEEFQGAVMGHLSKRHGIITGTEGTEGWFTVYAEV-PLND-MF 691
            ||.:        ||::|..:..|.|:.|.|:....:|.|:...:...:....:...| ||:: :.
  Fly   498 KEYY--------EPLVLGTIITPTEYVGQVISLCVERRGLQQSSVNIDDTRVLMKYVLPLSEIIL 554

  Fly   692 GYAGELRSSTQGKGEFTMEYSRYSP 716
            .:...|:|.:.|...|:.|...|.|
  Fly   555 DFHDRLKSLSSGYASFSYEDHGYHP 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFG1NP_609105.1 EF-G 44..316 CDD:206673 71/278 (26%)
PRK12740 48..727 CDD:237186 144/690 (21%)
mtEFG1_II_like 347..427 CDD:293908 19/86 (22%)
EFG_III 441..516 CDD:293919 18/79 (23%)
EFG_mtEFG1_IV 519..636 CDD:238715 12/116 (10%)
mtEFG1_C 641..718 CDD:239764 19/78 (24%)
wawNP_001027089.1 PRK05433 94..695 CDD:235462 151/701 (22%)
LepA 100..277 CDD:206677 72/280 (26%)
EF4_II 285..370 CDD:293900 19/86 (22%)
EF4_III 386..461 CDD:293917 18/76 (24%)
lepA_C 502..581 CDD:239680 19/78 (24%)
LepA_C 589..695 CDD:283959
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464680
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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