DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mEFG1 and Eef2

DIOPT Version :9

Sequence 1:NP_609105.1 Gene:mEFG1 / 34004 FlyBaseID:FBgn0263133 Length:745 Species:Drosophila melanogaster
Sequence 2:NP_031933.1 Gene:Eef2 / 13629 MGIID:95288 Length:858 Species:Mus musculus


Alignment Length:858 Identity:209/858 - (24%)
Similarity:345/858 - (40%) Gaps:191/858 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 IRNIGISAHIDSGKTTLTERILFYTGRIAEMHEVRGKDNVGAT--MDSMELERQRGITIQSAATY 104
            |||:.:.||:|.||:|||:.::...|.||..       ..|.|  .|:.:.|::|.|||:|.|..
Mouse    19 IRNMSVIAHVDHGKSTLTDSLVCKAGIIASA-------RAGETRFTDTRKDEQERCITIKSTAIS 76

  Fly   105 TLWK----DTN------------INIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLT 153
            ..::    |.|            ||:||:||||||:.||..||||.|||::|:..|.||..||.|
Mouse    77 LFYELSENDLNFIKQSKDGSGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTET 141

  Fly   154 VNRQMKRYNVPCLAFINKLDR----LGSNPYRVLSQMRSKMNHNAAFIQLPIGV-ESNCKG--IV 211
            |.||.....:..:..:||:||    |...| ..|.|...::..|...|....|. ||...|  ::
Mouse   142 VLRQAIAERIKPVLMMNKMDRALLELQLEP-EELYQTFQRIVENVNVIISTYGEGESGPMGNIMI 205

  Fly   212 DLVREKAIYFEGEHGMDIRLDEIPQ----------DMRVESLERRQELIEHLSNADETLGELFLE 266
            |.|.....:..|.||....|.:..:          :.::.:.||.:::.:.:.   :..|:.:.:
Mouse   206 DPVLGTVGFGSGLHGWAFTLKQFAEMYVAKFAAKGEGQLSAAERAKKVEDMMK---KLWGDRYFD 267

  Fly   267 ------EKPFTEDDIKAALRRTC------INRTFTPVL-----------------VGTALKNKGV 302
                  .|.....|.|...|..|      |.:.|..::                 :.:..|:|..
Mouse   268 PANGKFSKSANSPDGKKLPRTFCQLILDPIFKVFDAIMNFRKEETAKLIEKLDIKLDSEDKDKEG 332

  Fly   303 QPLLDAVLD---------------YLPNP--GEVENLGFIEKEGQDPEKVVLNPARDGKDPFVGL 350
            :|||.||:.               :||:|  .:......:.:...|.|..:...:.|.|.|.:..
Mouse   333 KPLLKAVMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMY 397

  Fly   351 AFKL----EAGRFGQLTYLRCYQGVLRKGDNIF----NARTNKK-----VRIARLVRLHSNQMED 402
            ..|:    :.|||  ..:.|.:.||:..|..:.    |....||     ..|.|.:.:....:|.
Mouse   398 ISKMVPTSDKGRF--YAFGRVFSGVVSTGLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEP 460

  Fly   403 VNEVYAGDIFALFGVD---CASGDTFTTNPKNNLSMESIFVPEPVVSMAIKPNNTKDRDNFSKAI 464
            :.:|..|:|..|.|||   ..:|...|....:|:.:.. |...|||.:|::..|..|.....:.:
Mouse   461 IEDVPCGNIVGLVGVDQFLVKTGTITTFEHAHNMRVMK-FSVSPVVRVAVEAKNPADLPKLVEGL 524

  Fly   465 ARFTKEDPTFHFFFDNDVKETLVSGMGELHLEIYAQRMEREYGC-PVTLGKPKVAFRETLVGPCE 528
            .|..|.||......: :..|.:::|.|||||||..:.:|.::.| |:....|.|::|||:.....
Mouse   525 KRLAKSDPMVQCIIE-ESGEHIIAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESN 588

  Fly   529 FDYLHKKQSGGSGQYARI---------------IGVMEPLPPNQNTLLE--------------FV 564
            ...|.|..:..:..|.:.               :...:.|......|.|              |.
Mouse   589 VLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFG 653

  Fly   565 DETVGTNVPKQFVPGVE----------KGYREMAEKGMLSGHKLSGIRFRLQD----------GG 609
            .:..|.|:......||:          .|::...::|.|....:.|:||.:.|          ||
Mouse   654 PDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGG 718

  Fly   610 HHIVDSSE---LAFMLAAHGAIKEVFQNGSWQILEPIMLVEVTAPEEFQGAVMGHLSKRHGIITG 671
            ..|:.::.   .|.:|.|..           :::|||.|||:..||:..|.:.|.|:::.|.:..
Mouse   719 GQIIPTARRCLYASVLTAQP-----------RLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFE 772

  Fly   672 TEGTEG--WFTVYAEVPLNDMFGYAGELRSSTQGKGEFTMEYSRYSPCLPD-----VQDQIVRQY 729
            .....|  .|.|.|.:|:|:.||:..:|||:|.|:.        :..|:.|     ..|......
Mouse   773 ESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQA--------FPQCVFDHWQILPGDPFDNSS 829

  Fly   730 QESQGLAQPDKKK 742
            :.||.:|:..|:|
Mouse   830 RPSQVVAETRKRK 842

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFG1NP_609105.1 EF-G 44..316 CDD:206673 92/350 (26%)
PRK12740 48..727 CDD:237186 201/835 (24%)
mtEFG1_II_like 347..427 CDD:293908 22/95 (23%)
EFG_III 441..516 CDD:293919 22/75 (29%)
EFG_mtEFG1_IV 519..636 CDD:238715 27/168 (16%)
mtEFG1_C 641..718 CDD:239764 25/78 (32%)
Eef2NP_031933.1 PTZ00416 1..858 CDD:240409 209/858 (24%)
EF2 20..233 CDD:206672 74/220 (34%)
EF2_snRNP_like_II 394..488 CDD:293901 22/95 (23%)
EF2_snRNP_III 503..574 CDD:293918 22/71 (31%)
aeEF2_snRNP_like_IV 574..746 CDD:238839 32/182 (18%)
eEF2_snRNP_like_C 742..821 CDD:239763 27/86 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0480
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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