DRSC/TRiP Functional Genomics Resources

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Protein Alignment mEFG1 and HBS1

DIOPT Version :9

Sequence 1:NP_609105.1 Gene:mEFG1 / 34004 FlyBaseID:FBgn0263133 Length:745 Species:Drosophila melanogaster
Sequence 2:NP_001286906.1 Gene:HBS1 / 117365 FlyBaseID:FBgn0042712 Length:670 Species:Drosophila melanogaster


Alignment Length:534 Identity:101/534 - (18%)
Similarity:162/534 - (30%) Gaps:215/534 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 ISAHIDSGKTTLTERILFYTG----RIAEMHEVRGKDNVGA-------TMDSMELERQRGITIQS 100
            :..|:|:||:||...:|:.||    |:...||...| .:|.       .:|....||.||||:..
  Fly   252 VIGHVDAGKSTLMGHLLYDTGNVSQRVMHKHEQESK-KLGKQSFMYAWVLDETGEERARGITMDV 315

  Fly   101 AATYTLWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPC 165
            ..:....|...:.::|.|||.||...:.......|.|:||:.|..|.......:..|.:.:.:..
  Fly   316 GQSRIETKTKIVTLLDAPGHKDFIPNMISGATQADVALLVVDATRGEFESGFELGGQTREHAILV 380

  Fly   166 LAF--------INKLDRLGSNPYRVLSQMRSKMNHNAAFIQLPIGVESNCKGIVDLVREKAIYFE 222
            .:.        |||||.:|                                              
  Fly   381 RSLGVNQLGVVINKLDTVG---------------------------------------------- 399

  Fly   223 GEHGMDIRLDEIPQDMRVESLERRQELIEHLSNADETLGELFLEEKPFTEDDIKAALRRTCINRT 287
                              .|.:|..|::..|.:        ||:...|.:.|:           :
  Fly   400 ------------------WSQDRFTEIVTKLKS--------FLKLAGFKDSDV-----------S 427

  Fly   288 FTPV--LVGTALKNKGVQPLLD------AVLDYLPNPGEVENLGFIEKEGQDPEKVVLNPARDGK 344
            |||.  |.|..|..|..:|.|.      .:||.      :||.       :.||:.:..|.|...
  Fly   428 FTPCSGLTGENLTKKAQEPALTNWYSGRHLLDV------IENF-------KIPERAIDRPLRMSV 479

  Fly   345 DPF---VGLAFKLEAGRFGQLTYLRCYQGVLRKGDNIFNARTNKKVRIARLVRLHSNQMEDVNE- 405
            ...   .|..|.:..         |...|||...|.:....:.::.::..|.         :|| 
  Fly   480 SDIYKGTGSGFCISG---------RVETGVLCLNDKVLVGASREQAQVKSLT---------MNEF 526

  Fly   406 ----VYAGDIFALFGVDCASGDTFTTNPKNNLSMESIF----VPEPVVSMAIKPNNTKDRDNFSK 462
                |:|||..::         |......||:::..|.    .|.||.:            .|..
  Fly   527 PQTCVFAGDQVSV---------TLPALDINNVTVGCIISDPQTPIPVTT------------RFQA 570

  Fly   463 AIARFTKEDPTFHFFFDNDVKETLVSGMGELHLEIYAQRMEREYGCPVTLGKPKVAFRETLVGP- 526
            .|..|             :||                        .|:|:|.|.:...::|:.| 
  Fly   571 RIIVF-------------NVK------------------------VPITMGFPVLLHHQSLIEPA 598

  Fly   527 --CEFDYLHKKQSG 538
              |:......|.:|
  Fly   599 VVCKLTASIHKSTG 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFG1NP_609105.1 EF-G 44..316 CDD:206673 60/295 (20%)
PRK12740 48..727 CDD:237186 101/533 (19%)
mtEFG1_II_like 347..427 CDD:293908 15/87 (17%)
EFG_III 441..516 CDD:293919 11/74 (15%)
EFG_mtEFG1_IV 519..636 CDD:238715 5/23 (22%)
mtEFG1_C 641..718 CDD:239764
HBS1NP_001286906.1 HBS1_N 83..145 CDD:286079
TEF1 241..669 CDD:227581 101/534 (19%)
EF1_alpha 249..468 CDD:206670 62/312 (20%)
HBS1-like_II 474..557 CDD:293912 20/109 (18%)
HBS1_C_III 561..669 CDD:294008 17/101 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464665
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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