DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4502 and Ube2q2l

DIOPT Version :10

Sequence 1:NP_609103.1 Gene:CG4502 / 34002 FlyBaseID:FBgn0031896 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_001129469.1 Gene:Ube2q2l / 317341 RGDID:1563226 Length:372 Species:Rattus norvegicus


Alignment Length:204 Identity:92/204 - (45%)
Similarity:132/204 - (64%) Gaps:13/204 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 AVWDSPGKRRRQDHKVAPTTERQLVAAPDHTIRTRRLMKEYREMERLQAKNDAVFTVELVNDSLF 171
            |:.::..|.:||:|.      ...|:...|.  :.|||||.||:.|.|:.....::|||:||||:
  Rat   178 AILENIKKSQRQEHL------NGTVSGSVHA--SNRLMKELREIYRSQSYKSGTYSVELINDSLY 234

  Fly   172 EWHVRLHVIDPDSPLARDM----AEMGVPAILLHLSFPDNFPFAPPFMRVVEPHIEKGYVMEGGA 232
            :|||:|..:||||||..|:    .:.|:..|||:.||.|||||.|||:||..|.:..|||:.|||
  Rat   235 DWHVKLRKVDPDSPLYGDLQLLKEKEGIEYILLNFSFKDNFPFDPPFVRVELPILSGGYVLGGGA 299

  Fly   233 ICMELLTPRGWASAYTVEAVIMQFAASVVKGQGRIARKPKSTKEFTRRQAEESFRSLVKTHEKYG 297
            :||||||.:||:|||::|:||||..|::|||:.|: |......::....|::|:.|:|:.|||.|
  Rat   300 LCMELLTKQGWSSAYSIESVIMQINATLVKGKARV-RFGADKNQYNLETAQQSYDSVVQMHEKKG 363

  Fly   298 WVTPALSDG 306
            |.||...||
  Rat   364 WFTPPKEDG 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4502NP_609103.1 UBCc_UBE2Q 141..293 CDD:467422 76/155 (49%)
Ube2q2lNP_001129469.1 RWD 8..>88 CDD:399058
UBCc_UBE2Q 205..359 CDD:467422 76/154 (49%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.