DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4502 and ubc-25

DIOPT Version :9

Sequence 1:NP_609103.1 Gene:CG4502 / 34002 FlyBaseID:FBgn0031896 Length:306 Species:Drosophila melanogaster
Sequence 2:NP_492764.2 Gene:ubc-25 / 172941 WormBaseID:WBGene00006720 Length:387 Species:Caenorhabditis elegans


Alignment Length:278 Identity:92/278 - (33%)
Similarity:152/278 - (54%) Gaps:31/278 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 NNNNNDKVDGATGSSPNINNNNNNNNNNNNHDGAAAPSSAGGVAVAGGAVGSSGSSGAAKNAVVR 101
            ::..::.:|........:::::....::.:.||     ....|.:|.....|....|.:|..:..
 Worm   133 SDTTSEPIDDDMAGDGEVDDDDEEEEDDEDADG-----DIEIVEMAEEDPTSQHDVGVSKEGLDM 192

  Fly   102 MAAEQAVWDSPGKRRRQDH---KVAPTTERQLVAAPDHTIRTRRLMKEYREMERLQAKNDAVFTV 163
            :       |...|..||.|   ||..:     :.|.|      |||||.|::.|.:...:.::|.
 Worm   193 L-------DKVSKINRQQHLDGKVQGS-----ITATD------RLMKEIRDIHRSEHFKNGIYTF 239

  Fly   164 EL-VNDSLFEWHVRLHVIDPDSPLARDMAEM----GVPAILLHLSFPDNFPFAPPFMRVVEPHIE 223
            || ..::|::|.::||.:|.||||..||.::    ....:|...:|.:.||..|||:|||.|||.
 Worm   240 ELEKEENLYQWWIKLHKVDEDSPLFEDMKKLKKDHNQDHLLFSFTFNEKFPCDPPFVRVVAPHIN 304

  Fly   224 KGYVMEGGAICMELLTPRGWASAYTVEAVIMQFAASVVKGQGRIARKPKSTKEFTRRQAEESFRS 288
            :|:|:.||||||||||.:||:|||::|:.|:|.||::|||:.||:...|.|..::..:|::||:|
 Worm   305 QGFVLGGGAICMELLTKQGWSSAYSIESCILQIAATLVKGRARISFDAKHTSTYSMARAQQSFKS 369

  Fly   289 LVKTHEKYGWVTPALSDG 306
            |.:.|.|.||.||..::|
 Worm   370 LQQIHAKSGWYTPPKTEG 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4502NP_609103.1 UBCc 140..>258 CDD:238117 54/122 (44%)
ubc-25NP_492764.2 UBCc 218..376 CDD:214562 69/157 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0897
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1825
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1214134at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4130
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.800

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