DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4496 and znf1003

DIOPT Version :10

Sequence 1:NP_609101.1 Gene:CG4496 / 34000 FlyBaseID:FBgn0031894 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_001104681.1 Gene:znf1003 / 793476 ZFINID:ZDB-GENE-080219-42 Length:336 Species:Danio rerio


Alignment Length:478 Identity:111/478 - (23%)
Similarity:162/478 - (33%) Gaps:170/478 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 PDPVRYEYQEPEENFISIDDVKIKSFLWQIGQQQREKELEIKRIMEQEKREKREKERREAEKRRD 107
            |:|.|.:.::.||    :.|||                        :|..|..|.|.:...|   
Zfish     4 PEPCRIKQEDTEE----LIDVK------------------------EESEELSEDEEKHQVK--- 37

  Fly   108 QEVIELDEEEAQS-PRGLIISAARSLAHWNSSIRRVTPDIELIPRRVHRVVAEIELSDSDHDEDS 171
                  .|||.|| |..|......:..:.|..:.:...| ||...:||            |...:
Zfish    38 ------SEEETQSEPEHLFSLQTNTNNNHNLMVTKEESD-ELSVDKVH------------HSVHT 83

  Fly   172 EVDEDVSLPSNAVSCVLNEQRQDGSQNPQELVIIVPSDQEDEQKTDNVIKRKSSGSRRLVKRRPG 236
            ||.     |::...|..:.::....|..|::                                  
Zfish    84 EVK-----PNSCTLCGKSYKQLSHLQQHQKI---------------------------------- 109

  Fly   237 ANRRGRHMYECPDCGKKVQSNYNLRRHMMIHTGERPFPCDLCERRFREFSDLKKHRRRHSHDPQF 301
              ..|...|.|..|||:.:.:..|.:||.|||||||..||.|.|.|...|:|::|...|:::..:
Zfish   110 --HTGERPYTCDQCGKRFRRSSTLNQHMKIHTGERPHYCDQCGRTFLRTSELRRHLTVHTNEKPY 172

  Fly   302 ICMICHLGAPLEQDSTRCADCESKNLMVKPQPEELGEKTTEEHSDEMEGDDDEIEEAALENEKQP 366
            .|..|  |....:.|         ||.|. |....|.|   ||.. :|.....|....|:..::.
Zfish   173 SCSEC--GKSFSRLS---------NLKVH-QKIHAGVK---EHVC-IECGKSFINAQVLQIHQRI 221

  Fly   367 QVATQPSLMVTLIPPIQSPPEKVPSHTQPSRPPLPRSCSSANSSSSLSNDGNIAGKSMSRTRRSY 431
            ....:|                                                          |
Zfish   222 HTGEKP----------------------------------------------------------Y 228

  Fly   432 PCPLCHRPFGTRHNLKRHYMIHTGEKPFSCSKCRKPFRECSTLKKHMVTHVRDRWYKCLRCPSKF 496
            .|..|.:.|...|:||.|..|||||||::|::|.|.|:..|.|::||:.|.|.:.:||.:|...|
Zfish   229 KCSHCDKRFSLLHSLKSHERIHTGEKPYTCTQCGKSFKNSSQLRQHMMIHTRVKTHKCDQCGKTF 293

  Fly   497 RDYLEYSDHKNNHQDQLSSRKSS 519
               |..| |..||....:..|||
Zfish   294 ---LRPS-HLKNHLTVHTKEKSS 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4496NP_609101.1 SFP1 <208..298 CDD:227516 25/89 (28%)
zf-C2H2 245..267 CDD:395048 8/21 (38%)
C2H2 Zn finger 247..267 CDD:275368 7/19 (37%)
zf-H2C2_2 259..282 CDD:463886 14/22 (64%)
C2H2 Zn finger 275..295 CDD:275368 8/19 (42%)
zf-C2H2 431..453 CDD:395048 8/21 (38%)
C2H2 Zn finger 433..453 CDD:275368 7/19 (37%)
zf-H2C2_2 445..466 CDD:463886 12/20 (60%)
C2H2 Zn finger 461..481 CDD:275368 8/19 (42%)
C2H2 Zn finger 489..510 CDD:275368 7/20 (35%)
znf1003NP_001104681.1 COG5048 <36..269 CDD:227381 81/369 (22%)
C2H2 Zn finger 90..110 CDD:275368 3/55 (5%)
C2H2 Zn finger 118..138 CDD:275368 7/19 (37%)
C2H2 Zn finger 146..166 CDD:275368 8/19 (42%)
C2H2 Zn finger 174..194 CDD:275368 8/31 (26%)
C2H2 Zn finger 202..222 CDD:275368 3/20 (15%)
C2H2 Zn finger 230..250 CDD:275368 7/19 (37%)
SUF4-like 254..>310 CDD:411020 21/59 (36%)
C2H2 Zn finger 258..283 CDD:411020 10/24 (42%)
C2H2 Zn finger 258..278 CDD:275368 8/19 (42%)
C2H2 Zn finger 286..306 CDD:411020 8/23 (35%)
C2H2 Zn finger 286..306 CDD:275368 8/23 (35%)

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