DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4496 and znf1173

DIOPT Version :10

Sequence 1:NP_609101.1 Gene:CG4496 / 34000 FlyBaseID:FBgn0031894 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_001107892.1 Gene:znf1173 / 560662 ZFINID:ZDB-GENE-080220-12 Length:263 Species:Danio rerio


Alignment Length:323 Identity:82/323 - (25%)
Similarity:125/323 - (38%) Gaps:85/323 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 QNPQELVIIVPSDQEDEQKTDNVIKRKSSGSRRLVKRRPG--ANRRGRHMYECPDCGKKVQSNYN 259
            ::.:||:.::..::.:|...|.......|....|.:....  .|....:.:.|..|||..::.|.
Zfish    12 EDTEELIDVIVKEESEELSEDEEKHHVKSEENTLSETEQSILMNLTAVNGFICSQCGKSFKNKYT 76

  Fly   260 LRRHMMIHTGERPFPCDLCERRFREFSDLKKHRRRHSHDPQFICMICHLGAPLEQDSTRCADCES 324
            |..|||||.||:|:.|..||:.|....:||||.|.|:.:..:.|::|  |....|.|:.....:.
Zfish    77 LNYHMMIHNGEKPYTCSHCEKSFSHSGNLKKHERTHTGEKPYHCVVC--GMSFTQSSSLQRHTKK 139

  Fly   325 -KNLMVKPQPEELGEKTTEEHSDEMEGDDDEIEEAALENEKQPQVATQPSLMVTLIPPIQSPPEK 388
             .||:||.:.||      ||.|:|:                                     .|.
Zfish   140 IHNLIVKEEDEE------EEESEEV-------------------------------------VEA 161

  Fly   389 VPSHTQPSRPPLPRSCSSANSSSSLSNDGNIAGKSMSRTRRSYPCPLCHRPFGTRHNLKRHYMIH 453
            ...|........|.|||                             .|...|..:.:|:.|..||
Zfish   162 TTVHRSVQTKDKPHSCS-----------------------------WCGNSFAHQAHLREHERIH 197

  Fly   454 TGEKPFSCSKCRKPFRECSTLKKHMVTHVRDRWYKCLRC------PSKFRDYLEYSDHKNNHQ 510
            ||||||:|.:|.|.||..|:..:||:.|..::.:||..|      ||:.:.:|  ..||...|
Zfish   198 TGEKPFTCPQCGKSFRHSSSFTQHMMIHTGEKPHKCDHCGKTFLRPSQLKKHL--GVHKRRRQ 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4496NP_609101.1 SFP1 <208..298 CDD:227516 29/91 (32%)
zf-C2H2 245..267 CDD:395048 9/21 (43%)
C2H2 Zn finger 247..267 CDD:275368 9/19 (47%)
zf-H2C2_2 259..282 CDD:463886 12/22 (55%)
C2H2 Zn finger 275..295 CDD:275368 9/19 (47%)
zf-C2H2 431..453 CDD:395048 4/21 (19%)
C2H2 Zn finger 433..453 CDD:275368 4/19 (21%)
zf-H2C2_2 445..466 CDD:463886 12/20 (60%)
C2H2 Zn finger 461..481 CDD:275368 8/19 (42%)
C2H2 Zn finger 489..510 CDD:275368 7/26 (27%)
znf1173NP_001107892.1 C2H2 Zn finger 64..84 CDD:275368 9/19 (47%)
PHA00733 <89..145 CDD:177301 18/57 (32%)
C2H2 Zn finger 92..112 CDD:275368 9/19 (47%)
C2H2 Zn finger 120..141 CDD:275368 5/22 (23%)
COG5048 162..>239 CDD:227381 29/105 (28%)
C2H2 Zn finger 177..197 CDD:275368 6/48 (13%)
zf-H2C2_2 189..214 CDD:463886 14/24 (58%)
C2H2 Zn finger 205..225 CDD:275368 8/19 (42%)
C2H2 Zn finger 233..253 CDD:275368 5/21 (24%)

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