DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4496 and zgc:113348

DIOPT Version :10

Sequence 1:NP_609101.1 Gene:CG4496 / 34000 FlyBaseID:FBgn0031894 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_001013305.1 Gene:zgc:113348 / 503599 ZFINID:ZDB-GENE-050227-10 Length:338 Species:Danio rerio


Alignment Length:340 Identity:92/340 - (27%)
Similarity:128/340 - (37%) Gaps:63/340 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 SDQEDE-----QKTDNVIKRKSSG------SRRLVKRRPGANRR-----GRHMYECPDCGKKVQS 256
            |.|.:|     .:|:...::|.||      ..:..|.:...:|.     |..::.|..|||....
Zfish    35 SSQTEEGYTFSSQTEPTFRQKMSGCFCCPECGKCYKYKDSLSRHMKVHTGEGLFTCISCGKSYTE 99

  Fly   257 NYNLRRHMMIHTGERPFPCDLCERRFREFSDLKKHRRRHSHDPQFICMICHLGAPLEQDSTRCAD 321
            ...|..||..||||:||.|.||.:.:...:|||:|.|.||.:..:.|..|      ||..|    
Zfish   100 KGALESHMRFHTGEKPFACTLCGQSYTRKTDLKRHMRIHSGERPYKCPQC------EQSFT---- 154

  Fly   322 CESKNLMVKPQPEELGEKTTEEHSDEMEGDDDEIEEAALENEKQPQVATQPSLMVTLIPPIQSPP 386
              |||::.......:|.|...  .|:.  |...:..:.|....:.....:|.| .||.....|.|
Zfish   155 --SKNVLKDHLSRHIGVKAFS--CDQC--DKTFVTASNLRKHLKVHTGEKPHL-CTLCKKCFSRP 212

  Fly   387 EKVPSHTQPSRPPLPRSCSSANSSSSLSNDGNIAGKSMSRTRRSYPCPLCHRPFGTRHNLKRHYM 451
            |.:..|........|..||.                             |.:.|.|..|||.|..
Zfish   213 EHLQVHLYIHTGVKPHVCSD-----------------------------CGKSFKTPSNLKSHQK 248

  Fly   452 IHTGEKPFSCSKCRKPFRECSTLKKHMVTHVRDRWYKCLRCPSKFRDYLEYSDH-KNNHQDQLSS 515
            .|:|||||.||.|.|.|.....||.|...|..::.|||..|...|........| |.|...:.:|
Zfish   249 THSGEKPFKCSHCEKSFTFPGNLKYHERVHTGEKPYKCSTCGKSFGFLANVRAHEKKNLCKKPAS 313

  Fly   516 RKSSIYESDDDGDSS 530
            ...|...:.::|:||
Zfish   314 STPSEQSTSNEGESS 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4496NP_609101.1 SFP1 <208..298 CDD:227516 33/105 (31%)
zf-C2H2 245..267 CDD:395048 7/21 (33%)
C2H2 Zn finger 247..267 CDD:275368 7/19 (37%)
zf-H2C2_2 259..282 CDD:463886 12/22 (55%)
C2H2 Zn finger 275..295 CDD:275368 8/19 (42%)
zf-C2H2 431..453 CDD:395048 7/21 (33%)
C2H2 Zn finger 433..453 CDD:275368 7/19 (37%)
zf-H2C2_2 445..466 CDD:463886 13/20 (65%)
C2H2 Zn finger 461..481 CDD:275368 8/19 (42%)
C2H2 Zn finger 489..510 CDD:275368 6/21 (29%)
zgc:113348NP_001013305.1 SFP1 <50..139 CDD:227516 27/88 (31%)
C2H2 Zn finger 62..82 CDD:275368 2/19 (11%)
C2H2 Zn finger 90..110 CDD:275368 7/19 (37%)
COG5048 <114..265 CDD:227381 53/196 (27%)
C2H2 Zn finger 118..138 CDD:275368 8/19 (42%)
C2H2 Zn finger 146..166 CDD:275368 8/31 (26%)
C2H2 Zn finger 174..194 CDD:275368 3/21 (14%)
C2H2 Zn finger 202..222 CDD:275368 6/19 (32%)
C2H2 Zn finger 230..250 CDD:275368 9/48 (19%)
C2H2 Zn finger 258..278 CDD:275368 8/19 (42%)
zf-H2C2_2 270..293 CDD:463886 8/22 (36%)
C2H2 Zn finger 286..304 CDD:275368 4/17 (24%)

Return to query results.
Submit another query.