DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4496 and znf1162

DIOPT Version :10

Sequence 1:NP_609101.1 Gene:CG4496 / 34000 FlyBaseID:FBgn0031894 Length:580 Species:Drosophila melanogaster
Sequence 2:XP_068072387.1 Gene:znf1162 / 503527 ZFINID:ZDB-GENE-050220-5 Length:334 Species:Danio rerio


Alignment Length:405 Identity:98/405 - (24%)
Similarity:159/405 - (39%) Gaps:114/405 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 LSDSD----HDEDSEVDEDVSLPSNAVSCVLNEQRQD--GSQNPQELVIIVPSDQEDEQKTDNVI 220
            :||.:    ..||:|         ..:..::.|:.:|  |.:....    |.|::|.:.:|::.|
Zfish     1 MSDPEPCRIKQEDTE---------ELIGVMVKEESEDLSGDEEKHH----VKSEEETQSETEHRI 52

  Fly   221 KRKSSGSRRLVKRRPGANRRGRHMYECPDCGKKVQSNYNLRRHMMIHTGERPFPCDLCERRFREF 285
            .         ::|..|..      :.|..|||..::.:.|:||:||||||:|:.|..|::||.:.
Zfish    53 S---------IERTAGKG------FTCTQCGKSFKNKHLLKRHVMIHTGEKPYQCSHCDKRFNDS 102

  Fly   286 SDLKKHRRRHSHDPQFICMICHLGAPLEQDST-RCADCESKNLMVK-PQPEELGEKTTEEHSDEM 348
            .:||.|.|.|:.:..:.|..|  |....|.|: |.....:.||:.| .:.|:|.|......|..|
Zfish   103 GNLKTHARTHTGEKPYHCTAC--GKSFTQSSSLRTHTKHNHNLITKEEESEDLSEAKKVNFSVRM 165

  Fly   349 EGDDDEIEEAALENEKQPQVATQPSLMVTLIPPIQSPPEKVPSHTQPSRPPLPRSCSSANSSSSL 413
            :      ||                                           |.|||..  ..|.
Zfish   166 K------EE-------------------------------------------PYSCSVC--GKSF 179

  Fly   414 SNDGNIAGKSMSRT-RRSYPCPLCHRPFGTRHNLKRHYMIHTGEKPFSCSKCRKPFRECSTLKKH 477
            .:..:::...|..| .:.:.|..|.|.||...||.:|.:||:||||..|.:|.:.|...|.||.|
Zfish   180 KHQSSLSQHQMIHTGEKPHACIQCGRSFGQLSNLIQHMLIHSGEKPHKCDQCGRTFFRHSHLKNH 244

  Fly   478 MVTHVRDRWYKCLRCPSKFRDYLEYSDHKNNHQDQLSSRKSSIYESDDDGDSSVEDCLECCECQQ 542
            ...|.:::.|.|..|...|......|.|:..|                   :.|::.: |.||.:
Zfish   245 QSVHTKEKPYSCALCGKTFTRQSSLSLHEKIH-------------------TGVKEHV-CFECGK 289

  Fly   543 RFTELDAYTAHLKKH 557
            .|.:    ..:||:|
Zfish   290 TFFQ----AGYLKRH 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4496NP_609101.1 SFP1 <208..298 CDD:227516 29/89 (33%)
zf-C2H2 245..267 CDD:395048 8/21 (38%)
C2H2 Zn finger 247..267 CDD:275368 8/19 (42%)
zf-H2C2_2 259..282 CDD:463886 12/22 (55%)
C2H2 Zn finger 275..295 CDD:275368 8/19 (42%)
zf-C2H2 431..453 CDD:395048 8/21 (38%)
C2H2 Zn finger 433..453 CDD:275368 8/19 (42%)
zf-H2C2_2 445..466 CDD:463886 11/20 (55%)
C2H2 Zn finger 461..481 CDD:275368 7/19 (37%)
C2H2 Zn finger 489..510 CDD:275368 5/20 (25%)
znf1162XP_068072387.1 COG5048 <62..211 CDD:227381 51/201 (25%)
C2H2 Zn finger 64..84 CDD:275368 8/19 (42%)
C2H2 Zn finger 92..112 CDD:275368 8/19 (42%)
C2H2 Zn finger 120..138 CDD:275368 6/19 (32%)
C2H2 Zn finger 172..192 CDD:275368 4/21 (19%)
C2H2 Zn finger 200..220 CDD:275368 8/19 (42%)
COG5048 224..>272 CDD:227381 15/47 (32%)
C2H2 Zn finger 228..248 CDD:275368 7/19 (37%)
C2H2 Zn finger 256..276 CDD:275368 5/19 (26%)
C2H2 Zn finger 284..304 CDD:275368 7/21 (33%)
zf-H2C2_2 296..320 CDD:463886 3/5 (60%)
C2H2 Zn finger 312..332 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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