DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4496 and CG6791

DIOPT Version :9

Sequence 1:NP_001285707.1 Gene:CG4496 / 34000 FlyBaseID:FBgn0031894 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_650090.1 Gene:CG6791 / 41391 FlyBaseID:FBgn0037918 Length:1243 Species:Drosophila melanogaster


Alignment Length:660 Identity:131/660 - (19%)
Similarity:216/660 - (32%) Gaps:226/660 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 NFISIDDVKIK----------SFLWQIGQQQREKELEIKRIMEQEKREKREKERREAEKRRDQEV 110
            ||..|::.::|          ::..|..||.|...|..|......|..|...:|           
  Fly   546 NFEMINERQLKCTECDKIITNAYGIQNAQQHRITHLPFKAYARCRKCHKSYTDR----------- 599

  Fly   111 IELDEEEAQSPRGLIIS-AARSLAHWNSSIRRVTPDIELIPRRVHR----VVAE-----IELSDS 165
                       :||:.. |......|...:....|...|.|.:..|    .||.     |.|.|.
  Fly   600 -----------KGLVKHLATHHRVGWPRKLSGGCPAPILTPAKQPRKQIVTVANETYEIIYLDDV 653

  Fly   166 DH---DEDSEVDEDVSL---------------PSNAVSCVLNEQRQD----GSQNPQELVIIVPS 208
            |.   :||::..|.:..               |....:...|.||..    |:....:..:.|..
  Fly   654 DQGGMEEDNDFGEQMQAEEDEYPIAPPPPSPPPPPQPTTQGNHQRYKCVHCGTLFATQAAVRVHI 718

  Fly   209 DQEDEQKTDNVIKRKSSGSRRLVKRRPGANR--------RGRHMYECPDCGKKVQSNYNLRRHM- 264
            .::..:||  |::|         :|:|..:.        ...:::.||.||.:.::.:..|||: 
  Fly   719 SEKRCRKT--VVRR---------RRQPVMSSADPSVPTVEQNYIFLCPSCGFEYKTQFEWRRHIN 772

  Fly   265 MIHTGER------------PFPCDLCERRF--REFSDLKKHRRRHSHDPQFI-CMIC-------- 306
            .:|..::            .:.|..|:...  .:...|:.|..||.....:: |:||        
  Fly   773 EVHNFDKRQYLNMRQLDKYRYQCTQCKDIVCNSKLKGLQDHHFRHLPYRLYLKCLICGTCYNHKP 837

  Fly   307 ----HLGAPLEQDSTRCADCESKNLMVKPQPEELGEKTTEEHSDEMEGDDDEIEEAALENEKQPQ 367
                ||.|     .....|.|:..::.||: :.||                ..::.:.||.|.| 
  Fly   838 NIAAHLRA-----RHSIFDRETPTMITKPK-QVLG----------------RYKDNSRENPKLP- 879

  Fly   368 VATQPSLMVTLIPPIQSPPEKVPSHTQPSRPPLPRSCSSANSSSSLSND-----GNI----AGKS 423
                            |||   |:......||.|.:|||:.::|:.|..     |.:    ||.:
  Fly   880 ----------------SPP---PAPALAPAPPSPPACSSSAAASASSRSLKPQPGGLPARPAGLN 925

  Fly   424 MSRTRRSYP-----------CPLCHRPFGT----------RHNL------------KRHYMIHTG 455
            ......||.           ||.|::.|.:          :||.            ..||:    
  Fly   926 TLEDSISYHNAVDLDFITYFCPKCNQNFDSHAFWRKHIVEQHNFNSREGLNFRQIDNHHYL---- 986

  Fly   456 EKPFSCSKCRKPFRECST------LKKHMVTHVRDRWYKCLRCPSKFRDYLEYSDHKNNHQDQLS 514
                 |.:|.|......|      |:.|...|:..|.:|||.|..:|.....:..|.|...::..
  Fly   987 -----CLECYKRVTVTHTKGAIGQLQSHKFRHLPHRSFKCLTCGGEFVRKQMFFKHLNRDTNRCD 1046

  Fly   515 SRKSSIYESDD-DGDSSVEDC--LECCECQQRFT--ELDAYTAHLKKH----DLELYGMSI--DD 568
            :|....::.|: |.|:.:...  |.|.:|...|.  ....:..|:..|    .|||..|:.  :|
  Fly  1047 NRPHREFDDDEPDQDTLLSTIYHLTCPQCGDNFKTHNKKEWREHINDHHGLTKLELLHMTKVGED 1111

  Fly   569 V-----ADEE 573
            |     .|||
  Fly  1112 VYRCQDCDEE 1121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4496NP_001285707.1 zf-C2H2 245..267 CDD:278523 7/22 (32%)
C2H2 Zn finger 247..267 CDD:275368 7/20 (35%)
zf-H2C2_2 259..282 CDD:290200 6/35 (17%)
C2H2 Zn finger 275..295 CDD:275368 4/21 (19%)
zf-C2H2 431..453 CDD:278523 9/54 (17%)
C2H2 Zn finger 433..453 CDD:275368 8/41 (20%)
zf-H2C2_2 445..468 CDD:290200 6/34 (18%)
C2H2 Zn finger 461..481 CDD:275368 6/25 (24%)
C2H2 Zn finger 489..510 CDD:275368 6/20 (30%)
CG6791NP_650090.1 C2H2 Zn finger 167..188 CDD:275368
C2H2 Zn finger 208..230 CDD:275368
C2H2 Zn finger 235..256 CDD:275368
C2H2 Zn finger 516..532 CDD:275368
C2H2 Zn finger 557..580 CDD:275368 4/22 (18%)
C2H2 Zn finger 589..609 CDD:275368 6/41 (15%)
COG5236 <939..>1096 CDD:227561 33/165 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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