DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4496 and CG10654

DIOPT Version :10

Sequence 1:NP_609101.1 Gene:CG4496 / 34000 FlyBaseID:FBgn0031894 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_001261767.1 Gene:CG10654 / 39428 FlyBaseID:FBgn0036294 Length:412 Species:Drosophila melanogaster


Alignment Length:447 Identity:83/447 - (18%)
Similarity:129/447 - (28%) Gaps:191/447 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 RRVHRVVAEIE-----LSDSD-HDEDSEVDEDVSLPSNAVS---CVLNEQR-------------- 192
            |...:::.:|:     |.|.. ||.|:..:.:.|....|.|   |:...|.              
  Fly   110 RNFEKLLQDIDIGCHKLEDHTWHDLDTPSESNESTNPEAQSHAPCIAATQEIVSFIWPQVCLPLA 174

  Fly   193 ------QDGSQNPQELVIIVPSDQEDEQKTDNVIKRKSSGSRRLVKRRPGANRRG-RHMYECPDC 250
                  ..|:...:|:.:|     |||....::.:.|.|.|.:|:..|   .||| ||..||..|
  Fly   175 VILSRITLGASLEEEVYVI-----EDESAKQDLGQEKLSISSKLLGAR---KRRGVRHTLECRIC 231

  Fly   251 GKKVQSNYNLRRHMMIHTGERPFPCDLCERRFREFSDLKKHRRRHSHDPQFICMICHLGAPLEQD 315
            .:.......|..||..|.|.||:.|..|.:.:...:.|:.|.|:                     
  Fly   232 HRGFYKPSLLEAHMQQHEGLRPYTCVHCAKSYARANLLESHLRQ--------------------- 275

  Fly   316 STRCADCESKNLMVKPQPEELGEKTTEEHSDEMEGDDDEIEEAALENEKQPQVATQPSLMVTLIP 380
                                                                             
  Fly   276 ----------------------------------------------------------------- 275

  Fly   381 PIQSPPEKVPSHTQPSRPPLPRSCSSANSSSSLSNDGNIAGKSMSRTRRSYPCPLCHRPFGTRHN 445
                                            :.|:.:.|       |..|.||.|::.:....:
  Fly   276 --------------------------------MHNNADAA-------RIIYACPSCNKVYTANRS 301

  Fly   446 LK-----RHYMIHTGEKPFS---CSKCRKPFRECSTLKKHMVTH--VRDRWYKCLRCPSKFRDYL 500
            ||     .|...|..|.|.:   |.:|.|.|...:.|.:|.:.|  |..|.|.|..|..:|    
  Fly   302 LKYHMRRTHERYHESESPDARHICEECGKCFARKAHLTRHKMVHGSVEGRRYCCECCDRRF---- 362

  Fly   501 EYSDHKNNHQDQLSSRKSSIYESDDDGDSSVEDCLECCECQQRFTELDAYTAHLKKH 557
             |:  |.|..|.|..:         .|:.::  .|.|.:|.:.|.......||.:||
  Fly   363 -YT--KENMVDHLLRK---------HGNKNL--LLRCRKCGRIFQNSVELNAHGRKH 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4496NP_609101.1 SFP1 <208..298 CDD:227516 28/90 (31%)
zf-C2H2 245..267 CDD:395048 6/21 (29%)
C2H2 Zn finger 247..267 CDD:275368 5/19 (26%)
zf-H2C2_2 259..282 CDD:463886 9/22 (41%)
C2H2 Zn finger 275..295 CDD:275368 5/19 (26%)
zf-C2H2 431..453 CDD:395048 7/26 (27%)
C2H2 Zn finger 433..453 CDD:275368 6/24 (25%)
zf-H2C2_2 445..466 CDD:463886 8/28 (29%)
C2H2 Zn finger 461..481 CDD:275368 6/19 (32%)
C2H2 Zn finger 489..510 CDD:275368 6/20 (30%)
CG10654NP_001261767.1 zf-AD 39..115 CDD:462262 1/4 (25%)
C2H2 Zn finger 228..248 CDD:275368 5/19 (26%)
SFP1 <243..310 CDD:227516 20/191 (10%)
C2H2 Zn finger 256..313 CDD:275368 15/181 (8%)
SFP1 <287..376 CDD:227516 28/104 (27%)
C2H2 Zn finger 289..314 CDD:275368 6/24 (25%)
C2H2 Zn finger 325..345 CDD:275368 6/19 (32%)
C2H2 Zn finger 355..376 CDD:275368 8/36 (22%)
C2H2 Zn finger 385..405 CDD:275368 5/19 (26%)

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