DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4496 and wor

DIOPT Version :9

Sequence 1:NP_001285707.1 Gene:CG4496 / 34000 FlyBaseID:FBgn0031894 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster


Alignment Length:615 Identity:124/615 - (20%)
Similarity:203/615 - (33%) Gaps:193/615 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 ACGLIPPDPVRYEYQEPEENFISID-----DVKIKSFLWQIGQQQREKELEIKRIM-EQEKREKR 95
            |...:|.:|......|||...:..:     |..:.....|:.::..|:..||.|.. :...||:.
  Fly    39 ASAAVPMEPHWMAKSEPEPQPVPTELRRRFDAAMNQTKEQLARRIWEETREIARAFPDVFTREEI 103

  Fly    96 EKERR-----EAEKRRDQEVIELDEEEAQ----------SPRGLIISAARS------LAHWNSSI 139
            .|...     |.|...::||:|.:.|..|          ||  .||.|..|      |.::|:::
  Fly   104 AKSLARLGYGEFELPPEEEVMEPEPEPEQHLPLRYTRDASP--TIIKAEPSDEEQFPLRNYNNNL 166

  Fly   140 RRVTPDIELIPRRVHRVVAEI-----------------ELSDSDHDEDSEVDEDVSLPSNAVSCV 187
            .:...:.|.. .::..:..||                 |..|....:...:.|:::| .|....:
  Fly   167 LKSIAEYEDC-MKMQNIKEEIPPIPSPQLFYPPPTPLAEPEDLSVTQRRVLSENMNL-QNVARAL 229

  Fly   188 LNEQRQDGSQNPQELVIIVPSDQEDEQKTDNVIKRKSSGSRRLVKRRPGANRRGRHMYECPDCGK 252
            |:.|.......|.      |.|.|::|:..::.:.|...|..|             .|:|..|.|
  Fly   230 LSMQHMAPQHAPP------PIDMEEDQENQDINQLKIKSSNDL-------------YYQCQQCNK 275

  Fly   253 KVQSNYNLRRHMMIHTGERPFPCDLCERRFREFSDLKKHRRRHSHDPQFICMICHLGAPLEQDST 317
                                     |   :..::.|.||::.|:::                   
  Fly   276 -------------------------C---YATYAGLVKHQQTHAYE------------------- 293

  Fly   318 RCADCESKNLMVKPQPEELGE--KTTEEHSDEMEGDDDEIEEAALENEKQPQVATQPSLMVTLIP 380
                 .::..:::.||...|.  ..||..:|:...    :.:||       .||:..|:      
  Fly   294 -----STEYKIIRSQPGGSGAIVDQTEFCTDQASA----LIQAA-------NVASAQSM------ 336

  Fly   381 PIQSPPEKVPS-HTQPSRPPLPRSCSSANSS-SSLSN---------DGNIAGK--SMSRTRRSY- 431
               ..|..||. |.|        .|..:.|: |.||.         :||...|  |.....::| 
  Fly   337 ---QKPVGVPRYHCQ--------DCGKSYSTYSGLSKHQQFHCPSAEGNQVKKVFSCKNCDKTYV 390

  Fly   432 ----------------PCPLCHRPFGTRHNLKRHYMIHTGEKPFSCSKCRKPFRECSTLKKHMVT 480
                            .||:|.:.|.....|:.|...|||||||||..|.:.|.:.|.|:.||.|
  Fly   391 SLGALKMHIRTHTLPCKCPICGKAFSRPWLLQGHIRTHTGEKPFSCQHCNRAFADRSNLRAHMQT 455

  Fly   481 HVRDRWYKCLRCPSKFRDYLEYSDHKNNHQDQLSSRKSSIYESDDDGDSSVEDCLECCECQQRFT 545
            |...:.|.|..|...|           :....|:....|..:::..|..|...  ...:.||...
  Fly   456 HSDVKKYSCPTCTKSF-----------SRMSLLAKHLQSGCQTEQSGGPSGSG--GGFDQQQLQQ 507

  Fly   546 ELDAYTAHLKKHDLELYGMSIDDVADEEQD 575
            .|..|......|.| .|..|:.....||::
  Fly   508 HLQVYEEGHNPHQL-YYAGSVGSSNGEEEE 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4496NP_001285707.1 zf-C2H2 245..267 CDD:278523 4/21 (19%)
C2H2 Zn finger 247..267 CDD:275368 3/19 (16%)
zf-H2C2_2 259..282 CDD:290200 1/22 (5%)
C2H2 Zn finger 275..295 CDD:275368 4/19 (21%)
zf-C2H2 431..453 CDD:278523 7/38 (18%)
C2H2 Zn finger 433..453 CDD:275368 6/19 (32%)
zf-H2C2_2 445..468 CDD:290200 12/22 (55%)
C2H2 Zn finger 461..481 CDD:275368 7/19 (37%)
C2H2 Zn finger 489..510 CDD:275368 3/20 (15%)
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 7/47 (15%)
C2H2 Zn finger 317..334 CDD:275368 5/27 (19%)
zf-C2H2 345..367 CDD:278523 7/29 (24%)
C2H2 Zn finger 347..367 CDD:275368 6/27 (22%)
PHA00732 379..>417 CDD:177300 6/37 (16%)
C2H2 Zn finger 382..402 CDD:275368 1/19 (5%)
zf-C2H2_8 405..482 CDD:292531 28/87 (32%)
zf-C2H2 406..428 CDD:278523 6/21 (29%)
C2H2 Zn finger 408..428 CDD:275368 6/19 (32%)
zf-H2C2_2 421..444 CDD:290200 12/22 (55%)
zf-C2H2 434..456 CDD:278523 9/21 (43%)
C2H2 Zn finger 436..456 CDD:275368 7/19 (37%)
zf-H2C2_2 448..473 CDD:290200 9/35 (26%)
C2H2 Zn finger 464..481 CDD:275368 4/27 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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