DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4496 and Plzf

DIOPT Version :9

Sequence 1:NP_001285707.1 Gene:CG4496 / 34000 FlyBaseID:FBgn0031894 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_001285862.1 Gene:Plzf / 34622 FlyBaseID:FBgn0032401 Length:469 Species:Drosophila melanogaster


Alignment Length:414 Identity:88/414 - (21%)
Similarity:142/414 - (34%) Gaps:107/414 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 VTPDIELIPRRVHRVVAEIELSDSDHDED-SEVDEDVSLPSNAVSCVLNEQRQDGSQNPQELVII 205
            |:.:.||..|.:.:::|..||.:....:. .|..|...:|:..          :...||      
  Fly   105 VSKEHELHFRELAQILAVTELLNLYQLQPLGEAKEATEIPAPG----------EAQPNP------ 153

  Fly   206 VPSDQEDEQKTDNVIKRKSSGSRRLVKRRPGANRRGRHMYECPDCGKKVQSNYNLRRHMMIHTGE 270
                 :.|:|.:.|.:.:.|..:   .:.|.|.:....:..|..|..|.   |.::: |:.|.|.
  Fly   154 -----DPEKKAEAVFENRQSYFK---LKNPRAVKSSSKVNYCIGCDFKC---YQVQK-MIEHMGS 206

  Fly   271 -RP--FPCDLCERRFREFSDLKKHRRRHSHD--PQFICMICHLGAPLEQDSTRCADCESKNLMVK 330
             .|  ..|.|||..|.::.:...|.||||.|  ..|.|:.|.:     :.:||.|      |:|.
  Fly   207 CEPSHLICSLCEVGFLDWREYDTHLRRHSGDLRKPFFCLQCGI-----RFNTRAA------LLVH 260

  Fly   331 PQPEELGEKTTEEHSDEMEGDDDEIEEAALENEKQPQVATQPSLMVTLIPPIQSP--------PE 387
             ||         :||.|                 .|.:.               |        .:
  Fly   261 -QP---------KHSTE-----------------TPHIC---------------PHCGKGFKWKQ 283

  Fly   388 KVPSHTQPSRPPLPRSCSSANSSSSLSNDGNIAGKSMSRTRRSYPCPL--CHRPFGTRHNLKRHY 450
            .:.:|.....|.....|.....|:  ::...:....:..|...:.|.:  |......:.|||.|.
  Fly   284 GLSNHILVHNPEKQMLCDVCGYST--THMKALKSHKLLHTGEFFACTVSGCKHRANRKENLKLHI 346

  Fly   451 MIHTGEKPFSCSKCRKPFRECSTLKKHMVTHVRD--RWYKCLRCP-SKFRDYLEYSDHKNNHQDQ 512
            ..|...:.|.|..|...|.:...||:|.:.|..:  ..|||..|. |..|     ||....|..:
  Fly   347 ETHKQGRDFICEVCGCKFSQSKNLKRHALKHTENGPNRYKCQLCGFSSHR-----SDKMKEHVQR 406

  Fly   513 LSSRKSSIYESDDDGDSSVEDCLE 536
            :.:.|....|..:..|||..|..|
  Fly   407 VHTEKPVQLELSETVDSSFPDDFE 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4496NP_001285707.1 zf-C2H2 245..267 CDD:278523 5/21 (24%)
C2H2 Zn finger 247..267 CDD:275368 5/19 (26%)
zf-H2C2_2 259..282 CDD:290200 8/25 (32%)
C2H2 Zn finger 275..295 CDD:275368 7/19 (37%)
zf-C2H2 431..453 CDD:278523 6/23 (26%)
C2H2 Zn finger 433..453 CDD:275368 6/21 (29%)
zf-H2C2_2 445..468 CDD:290200 8/22 (36%)
C2H2 Zn finger 461..481 CDD:275368 6/19 (32%)
C2H2 Zn finger 489..510 CDD:275368 6/21 (29%)
PlzfNP_001285862.1 COG5048 <193..403 CDD:227381 60/273 (22%)
C2H2 Zn finger 214..234 CDD:275368 7/19 (37%)
C2H2 Zn finger 244..264 CDD:275368 9/40 (23%)
C2H2 Zn finger 272..292 CDD:275368 2/34 (6%)
C2H2 Zn finger 300..320 CDD:275368 2/21 (10%)
C2H2 Zn finger 330..349 CDD:275368 5/18 (28%)
C2H2 Zn finger 357..377 CDD:275368 6/19 (32%)
C2H2 Zn finger 387..408 CDD:275368 7/25 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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