DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4496 and CG9609

DIOPT Version :10

Sequence 1:NP_609101.1 Gene:CG4496 / 34000 FlyBaseID:FBgn0031894 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_573161.1 Gene:CG9609 / 32663 FlyBaseID:FBgn0030787 Length:403 Species:Drosophila melanogaster


Alignment Length:355 Identity:78/355 - (21%)
Similarity:116/355 - (32%) Gaps:129/355 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 KRRPG-ANRRGRHMYEC--PDCGKKVQSNYNLRRHMMIHTGERPFPCDL--CERRFREFSDLKKH 291
            |:|.| .|..|...|.|  |.|....:....|.||...|||.:...|..  |::.:...:.||:|
  Fly    21 KQRQGRRNSIGSAKYACSMPKCEATFKRLDQLDRHEYHHTGIKKHACSYEGCDKTYSIVTHLKRH 85

  Fly   292 RRRHSHDPQFICMICHLGAPLEQDSTRCADCESKNLMVKPQPEELGEKTTEEHSDEMEGDDDEIE 356
             .|.:|:                                 :||...:||.               
  Fly    86 -LRSTHE---------------------------------RPESAAKKTV--------------- 101

  Fly   357 EAALENEKQPQVATQPSLMVTLIPPIQSPPEKVPSHTQPSRPPLPRSCSSANSSSSLSNDGNIAG 421
            :.|||                                         .||  ....|:||    ..
  Fly   102 KCALE-----------------------------------------ECS--KMFISVSN----MT 119

  Fly   422 KSMSRTRRS---YPCPLCHRPFGTRHNLKRHYM-IHTGEKPFSCSKCRKPFRECSTLKKHMVTHV 482
            :.|..|..|   |||..|...|..:..||||.: .||.|.|:|||||.:.|.:....:.|   ..
  Fly   120 RHMRETHESPKVYPCSQCSAKFSQKLKLKRHEIREHTLEYPYSCSKCSRGFYQQWQCQSH---EP 181

  Fly   483 RDRWYKCLRCPSKFRDYLEYSDH-------KNNHQDQLSSRKSSIYESDDDGDSSVE----DCLE 536
            ..:.|:|..||.:|..:..|:.|       ||.|:   ..|..|.::...:....:|    :..:
  Fly   182 SCKLYECPGCPLQFDKWTLYTKHCRDSLHGKNRHK---CDRCDSAFDKPSELKRHLEVKHKEAAQ 243

  Fly   537 CCECQQRFT-------ELDAYTAHLKKHDL 559
            ..||...||       :..:|..:|::|.|
  Fly   244 TDECATSFTCNEEGCGKSYSYLRNLRQHML 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4496NP_609101.1 SFP1 <208..298 CDD:227516 21/70 (30%)
zf-C2H2 245..267 CDD:395048 7/23 (30%)
C2H2 Zn finger 247..267 CDD:275368 6/21 (29%)
zf-H2C2_2 259..282 CDD:463886 8/24 (33%)
C2H2 Zn finger 275..295 CDD:275368 5/21 (24%)
zf-C2H2 431..453 CDD:395048 9/22 (41%)
C2H2 Zn finger 433..453 CDD:275368 7/20 (35%)
zf-H2C2_2 445..466 CDD:463886 13/21 (62%)
C2H2 Zn finger 461..481 CDD:275368 6/19 (32%)
C2H2 Zn finger 489..510 CDD:275368 8/27 (30%)
CG9609NP_573161.1 COG5048 38..309 CDD:227381 71/338 (21%)
C2H2 Zn finger 40..59 CDD:275368 5/18 (28%)
zf-C2H2_8 67..150 CDD:464935 29/178 (16%)
C2H2 Zn finger 67..90 CDD:275368 6/23 (26%)
C2H2 Zn finger 106..126 CDD:275368 7/66 (11%)
C2H2 Zn finger 134..155 CDD:275368 7/20 (35%)
C2H2 Zn finger 188..210 CDD:275368 6/21 (29%)
C2H2 Zn finger 217..237 CDD:275368 3/19 (16%)
C2H2 Zn finger 253..276 CDD:275368 4/21 (19%)
C2H2 Zn finger 283..302 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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