DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ACADM and Mcad

DIOPT Version :9

Sequence 1:NP_001272972.1 Gene:ACADM / 34 HGNCID:89 Length:454 Species:Homo sapiens
Sequence 2:NP_648149.1 Gene:Mcad / 38864 FlyBaseID:FBgn0035811 Length:419 Species:Drosophila melanogaster


Alignment Length:444 Identity:286/444 - (64%)
Similarity:338/444 - (76%) Gaps:40/444 - (9%)


- Green bases have known domain annotations that are detailed below.


Human    10 RVLRSISRFHWRSQHTKANRQREPGLGFSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYP 74
            |.|.|.||.:....|...|       |.||..||.|.:.|..||||.|||||||||:|||:||||
  Fly    13 RQLVSQSRAYAAVSHVSPN-------GTSFALTEDQLQLQELARKFTREEIIPVAAQYDKSGEYP 70

Human    75 VPLIRRAWELGLMNTHIPENCDYSVCPLLEACTLYLDAFFLLLTGSNLNLHLNLGGLGLGTFDAC 139
            .|:|::||||||||.|||                                 .::|||.|..|..|
  Fly    71 WPIIKKAWELGLMNNHIP---------------------------------ADIGGLDLDVFTTC 102

Human   140 LISEELAYGCTGVQTAIEGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAG 204
            |.:|||||||||:.||:|.:.|||.|:|::||.:||||||||:.||||:.|||||||||||||:|
  Fly   103 LSAEELAYGCTGIMTALEASGLGQTPVILSGNKEQKKKYLGRLLEEPLVAAYCVTEPGAGSDVSG 167

Human   205 IKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRK 269
            |||:|||||||::||||||||||||.|||||:|||::||||.|.:|||||||||.|:||:..|||
  Fly   168 IKTRAEKKGDEWVINGQKMWITNGGVANWYFVLARTNPDPKCPPSKAFTGFIVERDSPGLTPGRK 232

Human   270 ELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAFDKTRPVVAAGAVGLAQRALDEATK 334
            |||||||.||||||.||||:|||||||||:|||||:|||.||||||.|||||||||||.||||.|
  Fly   233 ELNMGQRASDTRGITFEDVRVPKENVLIGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRCLDEALK 297

Human   335 YALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIAN 399
            |||||||||..:..|||:.||||:||:.||.:|::::.:|||:|.||||:|||||||..|.|:||
  Fly   298 YALERKTFGVPIAYHQAVQFMLADMAIGVETSRLAWRLSAWEIDQGRRNSYYASIAKCHAADMAN 362

Human   400 QLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVAREHIDKYK 453
            ::|:|||||.||||||:|||||||||||||||||||||||||||::|...:..|
  Fly   363 KIASDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIISRNMYEAAK 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACADMNP_001272972.1 CaiA 39..453 CDD:224871 276/413 (67%)
MCAD 41..451 CDD:173846 275/409 (67%)
McadNP_648149.1 CaiA 35..411 CDD:224871 276/408 (68%)
MCAD 37..414 CDD:173846 275/409 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 228 1.000 Domainoid score I2498
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3
Inparanoid 1 1.050 586 1.000 Inparanoid score I1002
Isobase 1 0.950 - 0 Normalized mean entropy S2116
OMA 1 1.010 - - QHG56625
OrthoDB 1 1.010 - - D281661at33208
OrthoFinder 1 1.000 - - FOG0005377
OrthoInspector 1 1.000 - - oto91157
orthoMCL 1 0.900 - - OOG6_101120
Panther 1 1.100 - - LDO PTHR48083
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3931
SonicParanoid 1 1.000 - - X3813
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.820

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