DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MICU1 and AT4G32060

DIOPT Version :9

Sequence 1:NP_001097110.1 Gene:MICU1 / 33999 FlyBaseID:FBgn0031893 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_194934.1 Gene:AT4G32060 / 829337 AraportID:AT4G32060 Length:498 Species:Arabidopsis thaliana


Alignment Length:368 Identity:114/368 - (30%)
Similarity:183/368 - (49%) Gaps:21/368 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 FRERKIIEYENRIRQFSTPDKVFRYFATIQVPVADDRHEVYMTPTDFLTSMTPGMKQPDGLGLDQ 222
            :|.:....||.|:|..|.|:|||.|||:::.    |:.|:.|.|.|.:.::.|.....:...:.:
plant   138 YRRKIFFNYEKRLRLQSPPEKVFEYFASVRT----DKGEILMKPADLMRAIVPVFPPSESHLVRE 198

  Fly   223 YRRYDPKSVGEQLNLHLEKNSIF--YKLGSYGLITFSDYIFLLTVLSISRRHFEIAFRMFDLNGD 285
            ......::.||   |....:..|  :.:.:.|||:|.:|||.:|:|||....|.:||:|||.:.:
plant   199 GYLTGERNPGE---LRCSPSEFFMLFDVDNDGLISFKEYIFFVTLLSIPESSFAVAFKMFDTDNN 260

  Fly   286 GDVDCEEFEMVATLVRQQTSMGTRHRDHANTGNTFKG--VNSALITYFFGPNMDEKLTIEKFLDF 348
            |::|.|||:.|.:|:|.|...|..|||...||....|  .:..|:.||||.:..:||..:||..|
plant   261 GEIDKEEFKTVMSLMRSQHRQGVGHRDGLRTGLHMTGSVEDGGLVEYFFGKDGSQKLKHDKFTKF 325

  Fly   349 QEQLQREILSLEFERKEPNDEGNITEADFAELLLAYAGYPLKKKQKKLKRVKR-----RFRDHGK 408
            .:.|..|:|.|||...:....|:|:..|||..::|.|  ......|.|.||:.     ..||  .
plant   326 MKDLTEEMLRLEFAHYDYKRRGSISAKDFALSMVAAA--DASHLSKLLDRVESLSEHPHLRD--M 386

  Fly   409 GISKQDYLDFFHFLNNINDVDTALTFYHIAGASIDQQTLQHVAKTVAMVNLSDHVVDVVFTIFDE 473
            .||.:::..|....:.:.....||..|..|...:..:..:..|..|..:.|||:|:::.|.:||.
plant   387 RISLKEFKQFDELRSKLGPFSLALFAYGKANGLLTMKDFKRAASQVCGITLSDNVIEIAFHVFDS 451

  Fly   474 NNDNQLSNKEFISVMKNRVQRGLEKPKDTGFLKMMRSVFKCAK 516
            |.|..||..||:.|:..| :|.:.:|...|..:.....:|.:|
plant   452 NQDGNLSVDEFLRVLHRR-ERDVAQPIAKGLSRYFSDGWKGSK 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MICU1NP_001097110.1 EFh <252..293 CDD:298682 20/40 (50%)
EF-hand_8 438..491 CDD:290545 17/52 (33%)
AT4G32060NP_194934.1 EFh 216..273 CDD:238008 24/56 (43%)
EFh_MICU 248..469 CDD:320080 74/224 (33%)
EF-hand motif 248..276 CDD:320080 13/27 (48%)
EF-hand motif 303..333 CDD:320080 11/29 (38%)
EF-hand motif 404..433 CDD:320080 5/28 (18%)
EF-hand motif 441..469 CDD:320080 11/27 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 55 1.000 Domainoid score I4120
eggNOG 1 0.900 - - E1_KOG2643
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4431
Inparanoid 1 1.050 172 1.000 Inparanoid score I1523
OMA 1 1.010 - - QHG54184
OrthoDB 1 1.010 - - D707988at2759
OrthoFinder 1 1.000 - - FOG0005802
OrthoInspector 1 1.000 - - otm3233
orthoMCL 1 0.900 - - OOG6_103708
Panther 1 1.100 - - O PTHR12294
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4777
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

Return to query results.
Submit another query.