DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MICU1 and Micu3

DIOPT Version :9

Sequence 1:NP_001097110.1 Gene:MICU1 / 33999 FlyBaseID:FBgn0031893 Length:525 Species:Drosophila melanogaster
Sequence 2:XP_006253262.1 Gene:Micu3 / 364601 RGDID:1563411 Length:523 Species:Rattus norvegicus


Alignment Length:500 Identity:126/500 - (25%)
Similarity:202/500 - (40%) Gaps:127/500 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 WGKVKRMLTPKVDADAGQRPSSAADVNGEDKSSESESEDSEDEE------------AGSDLHLHE 148
            ||:    |:....|..|........:.|:.::..||....|.:|            |.:...:..
  Rat    63 WGE----LSIAAAAGGGLVGLVCYQLYGDPRADPSELVAPELDESPRGRGLLPIPVAAAKETVAT 123

  Fly   149 GKKIREKVGF----RERKIIEYENRIRQFSTPDKVFRYFATIQVPVADDRHEVYMTPTDFLTSMT 209
            |:.:.|.:..    |||:                 ||.||:|:.     ..:::|||.||:.::|
  Rat   124 GRAVTEDLDLYATSRERR-----------------FRLFASIEC-----EGQLFMTPYDFILAVT 166

  Fly   210 PGMKQPDGLGLDQYRRYDP------KSVGEQ-LNLHLEK--------NSIFYKLGSYGLITFSDY 259
            ..               :|      ||:.:| |:..|.:        :.:|..|...|:|::::|
  Rat   167 TD---------------EPKFAKTWKSLSKQELSQMLSETPPVWKGSSKLFRNLKERGVISYTEY 216

  Fly   260 IFLLTVLSISRRHFEIAFRMFDLNGDGDVDCEEFEMVATLVRQQTSMGTRHRD------------ 312
            :|||.:|:.....|.|||.|||.:|:..||.:||.::..:.|::........|            
  Rat   217 LFLLCILTKPHAGFRIAFNMFDTDGNEMVDKKEFLVLQEIFRKKNEKRETKGDEEKRAMLRLQLY 281

  Fly   313 --HANTGNTFKG-------------------------------------VNSALITYFFGPNMDE 338
              |:.|.:..|.                                     .::.|:.:|||.....
  Rat   282 GYHSPTNSVLKPDAEELVSRSYWDTLRRSTSQALFSDLAERADDITSLVADTTLLVHFFGKKGKA 346

  Fly   339 KLTIEKFLDFQEQLQREILSLEFERKEPNDEGNITEADFAELLLAYAGYPLKKKQKKLKRVKRRF 403
            :|..|.|..|.:.||.|:|.:|| ....|....|:|.|||.:||.|..  ::.....|:.|:...
  Rat   347 ELNFEDFYRFMDNLQTEVLEIEF-LSYSNGMNTISEEDFAHILLRYTN--VENTSVFLENVRYSI 408

  Fly   404 RDHGKGISKQDYLDFFHFLNNINDVDTALTFYHIAGASIDQQTLQHVAKTVAMVNLSDHVVDVVF 468
            .:. |||:..::..||.||||:.|...||..|:.|..||.|...:........:.||.|:|:.||
  Rat   409 PEE-KGITFDEFRSFFQFLNNLEDFAIALNMYNFASRSIGQDEFKRAVYVATGLKLSPHLVNTVF 472

  Fly   469 TIFDENNDNQLSNKEFISVMKNRVQRGLEKPKDTGFLKMMRSVFK 513
            .|||.:.|:|||.||||.:||:|:.||....|........:|..|
  Rat   473 KIFDVDKDDQLSYKEFIGIMKDRLHRGFRGYKTVQKYPTFKSCLK 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MICU1NP_001097110.1 EFh <252..293 CDD:298682 17/40 (43%)
EF-hand_8 438..491 CDD:290545 23/52 (44%)
Micu3XP_006253262.1 EF-hand_8 442..495 CDD:290545 23/52 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D425365at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.