Sequence 1: | NP_001097107.1 | Gene: | Pvf3 / 33995 | FlyBaseID: | FBgn0085407 | Length: | 651 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_034346.1 | Gene: | Vegfd / 14205 | MGIID: | 108037 | Length: | 358 | Species: | Mus musculus |
Alignment Length: | 337 | Identity: | 69/337 - (20%) |
---|---|---|---|
Similarity: | 106/337 - (31%) | Gaps: | 99/337 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 379 EKSRNTPLIRNIENEVSAAKTLEDNDGHDVENIYARNYVAAKVGQKKEDQLGTPEAVIKARRLHA 443
Fly 444 QKQKSERALAHA---HMNQVLK------EATCRIPQKRCQLVQQDPSK----IYTPHCTILHRCS 495
Fly 496 EDSGCCPSRSQICAAKSTHNVELHFFVKSSKHRSVIE--KRTFVNHTECHC-----------IER 547
Fly 548 STYNEETAMAHYGQSVVRATIL----SCTCPKSFEKILQ--------------------DDGQCR 588
Fly 589 CDCSS----------GNYDCDWLKRGNE-----HFAMNDRKCIQQGRC---------KPPTCEFG 629
Fly 630 LYMDKHGRCPKQ 641 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Pvf3 | NP_001097107.1 | PDGF | 464..547 | CDD:238079 | 26/99 (26%) |
Vegfd | NP_034346.1 | PDGF | 114..198 | CDD:197537 | 25/86 (29%) |
4 X 16 AA repeats of C-X(10)-C-X-C-X(1,3)-C | 227..323 | 15/95 (16%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1364454at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |