Sequence 1: | NP_001097107.1 | Gene: | Pvf3 / 33995 | FlyBaseID: | FBgn0085407 | Length: | 651 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_446105.1 | Gene: | Vegfc / 114111 | RGDID: | 619800 | Length: | 415 | Species: | Rattus norvegicus |
Alignment Length: | 215 | Identity: | 53/215 - (24%) |
---|---|---|---|
Similarity: | 90/215 - (41%) | Gaps: | 59/215 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 452 LAHAHMN-QVLK-------EATCRIPQKRCQLVQQD----PSKIYTPHCTILHRCSEDSGCCPSR 504
Fly 505 SQICAAKSTHNVELHFF---VKSSKHRSVIEKRTFVNHTECHCIER-STYNEETAMAHYGQSVVR 565
Fly 566 ----ATILSC-----TCPKSFEKILQDDGQCRC--------------DCSSGNYD-CDWLKRGNE 606
Fly 607 HFAMNDRKCIQQGRCKPPTC 626 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Pvf3 | NP_001097107.1 | PDGF | 464..547 | CDD:238079 | 24/89 (27%) |
Vegfc | NP_446105.1 | PDGF | 127..207 | CDD:278756 | 23/84 (27%) |
4 X 16 AA repeats of C-X(10)-C-X-C-X(1,3)-C | 276..358 | 6/29 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1364454at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |