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Protein Alignment Pvf3 and pdgfb
DIOPT Version :9
Sequence 1: | NP_001097107.1 |
Gene: | Pvf3 / 33995 |
FlyBaseID: | FBgn0085407 |
Length: | 651 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001297028.1 |
Gene: | pdgfb / 100492827 |
XenbaseID: | XB-GENE-487583 |
Length: | 240 |
Species: | Xenopus tropicalis |
Alignment Length: | 117 |
Identity: | 25/117 - (21%) |
Similarity: | 46/117 - (39%) |
Gaps: | 16/117 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 441 LHAQKQKSERALAHAHM-------NQVLKEATCRIPQKRCQLVQQDPSK---IYTPHCTILHRCS 495
:|..:.....:.:|:.: ..|:.|...|:..........||:. :..|.|..:.||
Frog 62 IHQTRSSPTNSSSHSRVIRSLDAEKAVIAECKPRVEVFEISRKIVDPTNANFLVWPPCVEVQRC- 125
Fly 496 EDSGCCPSRSQICAAKSTH--NVELH-FFVKSSKHRSVIEKRTFVNHTECHC 544
||||.|::..||....| :|::: .|:.....:.|.......:|.:|.|
Frog 126 --SGCCNSKNMRCAPTRIHVRHVQVNKIFITPKGKKQVKVVVPLEDHHDCKC 175
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1364454at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.920 |
|
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