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Protein Alignment Pvf2 and pgfb
DIOPT Version :9
Sequence 1: | NP_523499.2 |
Gene: | Pvf2 / 33994 |
FlyBaseID: | FBgn0031888 |
Length: | 405 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_017207334.1 |
Gene: | pgfb / 557468 |
ZFINID: | ZDB-GENE-131127-445 |
Length: | 164 |
Species: | Danio rerio |
Alignment Length: | 184 |
Identity: | 39/184 - (21%) |
Similarity: | 65/184 - (35%) |
Gaps: | 52/184 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 155 PGDLTVLKERIAEQNSVEKLRTMK--YNNNRTRELKKRVEAHRLMMAKEGICRVPRPEVVHITRE 217
||. ...:...||.:|:...: :..:..|.::|.||. :...| .||.||
Zfish 20 PGQ----SSSLVNVNSTDKVMLFQEVWGKSFCRTIEKLVEV---------VQEYP-GEVEHI--- 67
Fly 218 TNTFYSPRATILHRCSDKVGCC-NAGWTCQ--MKRNETVDRVFDKVDGRSNEPIVISMENHTECG 279
:||....|.||: ||| :....|. :..|.|:..:..|...:..|.:.::...|..|.
Zfish 68 ----FSPACVPLVRCA---GCCGDENLECHPTLTSNTTMQLLKIKPAEQGQEYVEMTFVEHKACE 125
Fly 280 CVKVETRRKRSPICLCPKHFKDFSWAGSRAQWENEEHLELRLWERREQRCRCDC 333
| |.|.| ...:.:|:... |..:|:|::...||
Zfish 126 C------RLRKP-------------TTKQDRWKPRN----RGRKRKEKQKAKDC 156
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Pvf2 | NP_523499.2 |
PDGF |
204..280 |
CDD:294083 |
20/78 (26%) |
pgfb | XP_017207334.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1364454at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.920 |
|
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