Protein Alignment Pvf2 and Vegfd

DIOPT Version :9

• Sequence 1: NP_523499.2
• Gene: Pvf2 / 33994
• FlyBaseID: FBgn0031888
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_113949.2
• Gene: Vegfd / 360457
• RGDID: 620695
• Length: 326
• Species: Rattus norvegicus
• Alignment Length: 194
• Identity: 47/194 - (24%)
• Similarity: 71/194 - (36%)
• Gaps: 60/194 - (30%)

  Fly   207 PRPEVVHITRE----TNTFYSPRATILHRCSDKVGCCNAGWTCQMKRNETV--DRVFDKVDGRSN 265
            ||...|.:..|    ||||:.|....:.||.   ||||......|..:.:.  .::|:.....::
  Rat   118 PRETCVEVASELGKTTNTFFKPPCVNVFRCG---GCCNEESVMCMNTSTSYISKQLFEISVPLTS 179

  Fly   266 EP--IVISMENHTECGCVKVETRRKRSPI-----------C-----LCPKHFKDFSWAGSRA--- 309
            .|  :.:.:.|||.|.|:....|...|.|           |     |||   .|..|..::.
  Rat   180 VPELVPVKIANHTGCKCLPTGPRHPYSIIRRSIQIPEEDQCPHSKKLCP---VDMLWDNTKCKCV 241

  Fly   310 -QWEN-----EEHLELR---------LWERREQRCRCDC----------HLSDETCKRLKNGVE 348
             |.||     |:|..|:         :::  |.||.|.|          |..:.:|...|..:|
  Rat   242 LQDENPLPGTEDHSYLQEPALCGPHMMFD--EDRCECVCKAPCPGDLIQHPENCSCFECKESLE 303

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pvf2	NP_523499.2	PDGF	204..280	CDD:294083	22/80 (28%)
Vegfd	NP_113949.2	PDGF	114..198	CDD:197537	23/82 (28%)
		4 X 16 AA repeats of C-X(10)-C-X-C-X(1,3)-C	227..317		19/82 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1364454at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920