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Protein Alignment Pvf2 and vegfaa
DIOPT Version :9
Sequence 1: | NP_523499.2 |
Gene: | Pvf2 / 33994 |
FlyBaseID: | FBgn0031888 |
Length: | 405 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_009290293.1 |
Gene: | vegfaa / 30682 |
ZFINID: | ZDB-GENE-990415-273 |
Length: | 207 |
Species: | Danio rerio |
Alignment Length: | 147 |
Identity: | 37/147 - (25%) |
Similarity: | 58/147 - (39%) |
Gaps: | 22/147 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 200 KEGICRVPRPEVVHITR----ETNTFYSPRATILHRCSDKVGCCN-AGWTC--QMKRNETVD--R 255
|:..|:. |..:|.|.: |....|.|...:|.||: |||| ....| ...||.|:: |
Zfish 45 KKSACKT-RELLVDIIQEYPDEIEHTYIPSCVVLMRCA---GCCNDEALECVPTETRNVTMEVLR 105
Fly 256 VFDKVDGRSNEPIVISMENHTECGC---VKVETRRKRSP---ICLCPKHFKDFSWAGSRAQWENE 314
|..:| |.....:|...||:|.| .:|:.::::.| ....|...::....|..|.....
Zfish 106 VKQRV---SQHNFQLSFTEHTKCECRPKAEVKAKKEKKPRVRRVKNPNRAREGDSGGLSASAHLR 167
Fly 315 EHLELRLWERREQRCRC 331
....:.|.:|....|.|
Zfish 168 SSTTVSLAQREGSACMC 184
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Pvf2 | NP_523499.2 |
PDGF |
204..280 |
CDD:294083 |
26/84 (31%) |
vegfaa | XP_009290293.1 |
PDGF |
49..127 |
CDD:278756 |
26/84 (31%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1364454at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.920 |
|
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