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Protein Alignment Pvf2 and pgfa
DIOPT Version :9
Sequence 1: | NP_523499.2 |
Gene: | Pvf2 / 33994 |
FlyBaseID: | FBgn0031888 |
Length: | 405 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_021324415.1 |
Gene: | pgfa / 101883508 |
ZFINID: | ZDB-GENE-120928-4 |
Length: | 169 |
Species: | Danio rerio |
Alignment Length: | 86 |
Identity: | 22/86 - (25%) |
Similarity: | 34/86 - (39%) |
Gaps: | 26/86 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 210 EVVHITRE----TNTFYSPRATILHRCSDKVGCCN-----------AGWTCQMKRNETVDRVFDK 259
::|::.:| ....|||....|.||| |||| :..:.|:.|....:|..|.
Zfish 65 QMVYVEQEYPGAVEHIYSPGCVPLLRCS---GCCNDEKLACFPVSTSNISIQLLRITPAERRRDY 126
Fly 260 VDGRSNEPIVISMENHTECGC 280
| ::|.:.|..|.|
Zfish 127 V--------LLSFQEHQSCEC 139
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Pvf2 | NP_523499.2 |
PDGF |
204..280 |
CDD:294083 |
21/84 (25%) |
pgfa | XP_021324415.1 |
PDGF |
58..141 |
CDD:197537 |
22/86 (26%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1364454at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
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