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Protein Alignment Pvf2 and vegfbb
DIOPT Version :9
Sequence 1: | NP_523499.2 |
Gene: | Pvf2 / 33994 |
FlyBaseID: | FBgn0031888 |
Length: | 405 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_003200919.3 |
Gene: | vegfbb / 100535766 |
ZFINID: | ZDB-GENE-091204-285 |
Length: | 152 |
Species: | Danio rerio |
Alignment Length: | 88 |
Identity: | 20/88 - (22%) |
Similarity: | 36/88 - (40%) |
Gaps: | 14/88 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 203 ICRVPRPEVVHITRETNT----FYSPRATILHRCSDKVGCC-NAGWTC-QMKRNETV---DRVFD 258
:|: ||..:|.:..|.:. ...|....|.||. ||| :....| .:.::.|: .:...
Zfish 65 LCK-PRETLVKVEDEFSEVMLGHVVPSCVPLQRCG---GCCSDEAMVCVNVAKHTTIIQLQQYAT 125
Fly 259 KVDGRSNEPIV-ISMENHTECGC 280
..:|...|.|: :....|::|.|
Zfish 126 DSEGNMAESIIELPFVEHSQCQC 148
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Pvf2 | NP_523499.2 |
PDGF |
204..280 |
CDD:294083 |
19/85 (22%) |
vegfbb | XP_003200919.3 |
PDGF |
66..148 |
CDD:278756 |
19/85 (22%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1364454at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.920 |
|
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