Protein Alignment Caper and NAM8

DIOPT Version :10

• Sequence 1: NP_609095.1
• Gene: Caper / 33989
• FlyBaseID: FBgn0031883
• Length: 594
• Species: Drosophila melanogaster
• Sequence 2: NP_011954.1
• Gene: NAM8 / 856486
• SGDID: S000001128
• Length: 523
• Species: Saccharomyces cerevisiae
• Alignment Length: 321
• Identity: 72/321 - (22%)
• Similarity: 132/321 - (41%)
• Gaps: 79/321 - (24%)

  Fly   253 LEEFFSSVGKVR-DVRLI---TCNK-------TKRFKGIAYIEFDDPESVALALGLSGQRLLGVP 306
            :.:.::|:|:.. :||::   |.|.       .|..:|..:::|......|.||..:|
Yeast    70 VRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPSSTHAANALLKNG------- 127

  Fly   307 IMVQHTQAEKNRLQNAAPAFQPKSHT-------GPMRLYVGSLHFNITEDMLRGIF-EPFGKIDA 363
            :::.:...:|.:|..|..::...:::       ....::||.|..|:||..|..:| ..:.....
Yeast   128 MLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNVTESQLFELFINRYASTSH 192

  Fly   364 IQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRLMKVG-------NVTERLDMN--T 419
            .:::.|..||.||||||:.:.|:|:.:.||.::.|..|.||.:|||       :|:...|.|  :
Yeast   193 AKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRAIKVGPTSGQQQHVSGNNDYNRSS 257

  Fly   420 TSLDTDEMDRTGIDLG----ATGRLQLMFKLAEGAGLAVPQAAANALLATAPQPAPLQQQEVAPS 480
            :||:.:.:|...:..|    :.|...:.||....:....                |:|||   ||
Yeast   258 SSLNNENVDSRFLSKGQSFLSNGNNNMGFKRNHMSQFIY----------------PVQQQ---PS 303

  Fly   481 IATQCFILSNMFDPRTETNPTWDVE--IRDDVLEECAKHGGVLHIHVDTISHTGTVYVKCP 539
                   |::..||...|.....:.  :.:|.|....:..|.:            ||||.|
Yeast   304 -------LNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTI------------VYVKIP 345

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Caper	NP_609095.1	SF-CC1	213..578	CDD:273721	72/321 (22%)
NAM8	NP_011954.1	RRM1_NGR1_NAM8_like	55..144	CDD:410023	15/80 (19%)
		RRM2_SECp43_like	162..241	CDD:409781	28/78 (36%)
		RRM3_NGR1_NAM8_like	312..383	CDD:409782	9/46 (20%)