Protein Alignment Caper and SNP1

DIOPT Version :10

• Sequence 1: NP_609095.1
• Gene: Caper / 33989
• FlyBaseID: FBgn0031883
• Length: 594
• Species: Drosophila melanogaster
• Sequence 2: NP_012203.1
• Gene: SNP1 / 854749
• SGDID: S000001323
• Length: 300
• Species: Saccharomyces cerevisiae
• Alignment Length: 223
• Identity: 51/223 - (22%)
• Similarity: 81/223 - (36%)
• Gaps: 67/223 - (30%)

  Fly   309 VQHTQAEKNRLQNAAPAFQPK-SHTGPMR-LYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTE 371
            :::.|....||||..|...|. ..|.|.| :::|.|.:::.|..|:..|..||:|:.|:::.|..
Yeast    79 IKNAQLLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKI 143

  Fly   372 TGRSKGYGFITYHNADDAKKALEQL---NGFELAGRLMKVG------------------------ 409
            |.:||||.||.:.:...:|.|.:::   .|.::..|:..|.
Yeast   144 TQKSKGYAFIVFKDPISSKMAFKEIGVHRGIQIKDRICIVDIERGRTVKYFKPRRLGGGLGGRGY 208

  Fly   410 ----------------------NVTERLDMNTTSLDTDEMDRTG---IDLGATGRLQLMFKLAEG 449
                                  |...||....||......||.|   :|....|...|:
Yeast   209 SNRDSRLPGRFASASTSNPAERNYAPRLPRRETSSSAYSADRYGSSTLDARYRGNRPLL------ 267

  Fly   450 AGLAVPQAAANALLAT------APQPAP 471
             ..|.|.||..::..:      ..||||
Yeast   268 -SAATPTAAVTSVYKSRNSRTRESQPAP 294

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Caper	NP_609095.1	SF-CC1	213..578	CDD:273721	51/223 (23%)
SNP1	NP_012203.1	U1snRNP70_N	6..97	CDD:432406	6/17 (35%)
		RRM_SNP1_like	89..201	CDD:410194	30/111 (27%)