Sequence 1: | NP_609095.1 | Gene: | Caper / 33989 | FlyBaseID: | FBgn0031883 | Length: | 594 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_568220.1 | Gene: | AT5G09880 / 830848 | AraportID: | AT5G09880 | Length: | 527 | Species: | Arabidopsis thaliana |
Alignment Length: | 602 | Identity: | 229/602 - (38%) |
---|---|---|---|
Similarity: | 312/602 - (51%) | Gaps: | 116/602 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 DFDVEAMLEAPYMKNNVSAGSGGSGGRKRSGSSPGGGGGHDDDY--AENGPRNGSGGGSSHKKQS 66
Fly 67 KRSRSR-SGSRDGKSRRDRGNER-SSHRDKDKERDRNRDGGDRDRHRREGGDRDRERERER---E 126
Fly 127 RDRSRRSRSRDERGGGGRYGDRDKDRRSRDRRGGSKSLQVDRSRDKRRRSRSRDQQRKRLSPIRE 191
Fly 192 RKRSHSRSRDRNSRRRGTNSPRRRSPPNGADRTTPTELSPEERDARTVFCIQLSQRVRARDLEEF 256
Fly 257 FSSVGKVRDVRLITCNKTKRFKGIAYIEFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQN 321
Fly 322 AAPAFQPKSHTGP--MRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYH 384
Fly 385 NADDAKKALEQLNG-FELAGRLMKVGNVTERL---DMNTTSLDTDEMDRTGIDLGATGRLQLMFK 445
Fly 446 LAEGAGLA--------VP---QAAAN----------ALLATAPQPAPLQQQEVAPSIATQCFILS 489
Fly 490 NMFDPRTETNPTWDVEIRDDVLEECAKHGGVLHIHVDTISHTGTVYVKCPSTTTAVLAVNALHGR 554
Fly 555 WFAGRVITAAYVPVINY 571 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Caper | NP_609095.1 | RRM1_RBM39_like | 238..310 | CDD:240729 | 38/71 (54%) |
RRM2_RBM23_RBM39 | 337..409 | CDD:240730 | 37/72 (51%) | ||
RBM39linker | 425..500 | CDD:292157 | 32/95 (34%) | ||
RRM3_RBM39_like | 483..567 | CDD:240731 | 42/83 (51%) | ||
AT5G09880 | NP_568220.1 | SF-CC1 | 85..517 | CDD:273721 | 199/503 (40%) |
RRM1_RBM39_like | 169..241 | CDD:240729 | 38/71 (54%) | ||
RRM2_RBM23_RBM39 | 267..340 | CDD:240730 | 37/72 (51%) | ||
RBM39linker | 366..452 | CDD:292157 | 29/89 (33%) | ||
RRM3_RBM39_like | 434..517 | CDD:240731 | 43/86 (50%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 72 | 1.000 | Domainoid score | I3310 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0147 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 320 | 1.000 | Inparanoid score | I708 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0002599 | |
OrthoInspector | 1 | 1.000 | - | - | otm3449 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101917 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X1707 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
10 | 9.720 |