Protein Alignment Caper and RS31a

DIOPT Version :10

• Sequence 1: NP_609095.1
• Gene: Caper / 33989
• FlyBaseID: FBgn0031883
• Length: 594
• Species: Drosophila melanogaster
• Sequence 2: NP_182184.1
• Gene: RS31a / 819273
• AraportID: AT2G46610
• Length: 250
• Species: Arabidopsis thaliana
• Alignment Length: 184
• Identity: 43/184 - (23%)
• Similarity: 82/184 - (44%)
• Gaps: 36/184 - (19%)

  Fly   237 RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDDPESVALALGLS--- 298
            |.|:........|..|||..||..|:|:.|.:.:        |.|::.|:|......|:..:
plant     2 RHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMKS--------GYAFVYFEDERDAEDAIRRTDNT 58

  Fly   299 ----GQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTGPMR-LYVGSLHFN----ITEDMLRGI 354
                |:|.|.|. ..:..|.|:.:.::.    :..|:..|.: |:|  ::|:    ...||.|.
plant    59 TFGYGRRKLSVE-WAKDFQGERGKPRDG----KAVSNQRPTKTLFV--INFDPIRTRERDMERH- 115

  Fly   355 FEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRLMKV 408
            |||:||:..:::        .:.:.|:.:...:||.|||:..:..:|..:::.|
plant   116 FEPYGKVLNVRM--------RRNFAFVQFATQEDATKALDSTHNSKLLDKVVSV 161

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Caper	NP_609095.1	SF-CC1	213..578	CDD:273721	43/184 (23%)
RS31a	NP_182184.1	RRM_SF	2..73	CDD:473069	20/79 (25%)
		RRM_SF	96..165	CDD:473069	19/77 (25%)