Protein Alignment Caper and CG34354

DIOPT Version :10

• Sequence 1: NP_609095.1
• Gene: Caper / 33989
• FlyBaseID: FBgn0031883
• Length: 594
• Species: Drosophila melanogaster
• Sequence 2: NP_001097953.2
• Gene: CG34354 / 5740528
• FlyBaseID: FBgn0085383
• Length: 550
• Species: Drosophila melanogaster
• Alignment Length: 332
• Identity: 74/332 - (22%)
• Similarity: 121/332 - (36%)
• Gaps: 91/332 - (27%)

  Fly   289 ESVALA-LGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTG------PMRLYVGSLHFNI 346
            :||..| |..:||:        ||:|.::.:..:.....|.:...|      ...::||.|...|
  Fly    51 QSVTAAHLQHNGQQ--------QHSQQQQQQQMSQQQQQQQQQLVGNNSKPEQFHIFVGDLSAEI 107

  Fly   347 TEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRLMKVGNV 411
            ....|:..|.|||:|...:::.|.:|.:||||||:::....:|:.|:..:||..|..|.::....
  Fly   108 ETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQWLGSRSIRTNWA 172

  Fly   412 TE-----RLDMNTTSLDTDEMDRT-----------GIDLGATGRL--QLMFKLAEGAG------- 451
            |.     :.|||...|..||:...           ||:...:|.|  :::.|.....|
  Fly   173 TRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRV 237

  Fly   452 ----------LAVPQAAANALLATAPQPAPLQQQEVAPSIATQCFILSNMFDPRTETNPTWDVEI 506
                      .:..:||.:|::|.  ....:.||.|      :|               .|..|.
  Fly   238 FKDKGYAFVRFSTKEAATHAIVAV--NNTEINQQPV------KC---------------AWGKES 279

  Fly   507 RDDVLEECAKHGGVLHIHVDTISHTGTVYVKCPSTTTAVLAVNALHGRWFAGRVITAAYVPVINY 571
            .|.             .|:..|: .|.:....|..:.|..|..|.:|:..||    ..|.|...|
  Fly   280 GDP-------------NHMSAIA-GGALAQGFPFGSAAAAAAAAAYGQQVAG----YWYPPAPTY 326

  Fly   572 HTMFPDS 578
            ....|.|
  Fly   327 PAAAPAS 333

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Caper	NP_609095.1	SF-CC1	213..578	CDD:273721	73/330 (22%)
CG34354	NP_001097953.2	PABP-1234	<90..420	CDD:130689	63/285 (22%)
		RRM2_TIA1_like	97..171	CDD:409789	24/73 (33%)
		RRM3_TIA1_like	202..276	CDD:409790	14/96 (15%)