Protein Alignment Caper and rbm46

DIOPT Version :10

• Sequence 1: NP_609095.1
• Gene: Caper / 33989
• FlyBaseID: FBgn0031883
• Length: 594
• Species: Drosophila melanogaster
• Sequence 2: NP_001073493.2
• Gene: rbm46 / 566042
• ZFINID: ZDB-GENE-061013-298
• Length: 523
• Species: Danio rerio
• Alignment Length: 316
• Identity: 68/316 - (21%)
• Similarity: 108/316 - (34%)
• Gaps: 92/316 - (29%)

  Fly   167 DRSRDKRRRSRSRDQQRKRLSPIRERKRSHSRSRDRNSRRRGTNSP--RRRSPPNG--------- 220
            :||......||....:...|..:.:| ..:|..::...|:.|...|  ....||.|
Zfish     3 ERSSQPSDNSRMDSSKEAALLALMDR-TGYSMVQENGQRKFGGPPPGWEGPPPPRGREVFVGKIP 66

  Fly   221 ----ADRTTPT--------------ELSPEERDARTVF---------CIQLSQRVRAR------- 251
                .|...|.              |.|.|.|....|.         .|||......|
Zfish    67 RDMYEDELVPVFEQAGHIYEFRLMMEFSGENRGYAFVMYTTREKAQRAIQLLDNYEIRPGKFIGV 131

  Fly   252 -----DLEEFFSSVGK-----------------VRDVRLITCNKTKRFK--GIAYIEFDDPESVA 292
                 :...|..|:.|                 |.|| ::..:...|.|  |.|::|::..::.|
Zfish   132 CVSLDNCRLFIGSIPKDKKKEEIQEEMMKVTEGVMDV-IVYPSAVDRMKNRGFAFVEYESHKAAA 195

  Fly   293 LALG--LSGQ-RLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTGPMRLYVGSLHFNITEDMLRGI 354
            :|..  :.|. :|.|..|.|...:.||...:......:.        |||.:|..:.||:.||..
Zfish   196 MARRKLIPGTFQLWGHTIQVDWAEPEKELDEETMQRVRV--------LYVRNLMLSTTEETLRSE 252

  Fly   355 FEPF--GKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRLMKV 408
            |...  |.::.::.:.|        |.||.::|.:||..|||.:||..:.|..::|
Zfish   253 FSQLKPGSVERVKKLTD--------YAFIHFYNREDALTALESMNGKVIDGSPIEV 300

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Caper	NP_609095.1	SF-CC1	213..578	CDD:273721	58/268 (22%)
rbm46	NP_001073493.2	hnRNP-R-Q	18..431	CDD:273732	64/301 (21%)