Protein Alignment Caper and rbmx2

DIOPT Version :10

• Sequence 1: NP_609095.1
• Gene: Caper / 33989
• FlyBaseID: FBgn0031883
• Length: 594
• Species: Drosophila melanogaster
• Sequence 2: NP_001020337.2
• Gene: rbmx2 / 553240
• ZFINID: ZDB-GENE-050626-88
• Length: 450
• Species: Danio rerio
• Alignment Length: 283
• Identity: 89/283 - (31%)
• Similarity: 123/283 - (43%)
• Gaps: 74/283 - (26%)

  Fly    28 GGRKRSGSSPGGGGGHDDD-----YAENGP---------------------RNGSGGGSSHKKQS 66
            |..:.|.|||.......:|     |:..||                     ..|......|.:..
Zfish   187 GRSESSASSPIRVKKEKEDVAYEKYSVKGPAANRRDRADEQEQLKEKEREREEGKKTDRRHAETQ 251

  Fly    67 KRSRSRSGSRDG-KSR-RDRGNERSSHRDKDKERDRNRDGGDRDRHRREGGDRDRERERERERDR 129
            :|.|.|.|.|:| |.| ||||.:|...|.::::..|.|| |:|||.|...|.|.|:.||:||||.
Zfish   252 QRERDREGEREGDKERERDRGRQRDGERQRERDGGRQRD-GERDRERERDGGRQRDGERQRERDG 315

  Fly   130 SR-----RSRSRDERGGGGRYGDRDKDRRSRDRRGG-SKSLQVDRSRDK---RRRSRSRDQQRKR 185
            .|     |.|.|:..||..|.||||   |.::|.|| .:.::.||.|::   |:|...|||:::|
Zfish   316 GRQRDGERDRERERDGGRQRDGDRD---REQERDGGRQRDVERDRERERDGGRQRDGDRDQEQER 377

  Fly   186 -------LSPIRERKRSHSRSRD-RNSRRRGTNSPRRRSPPNGADRTTPTELSPEERDARTVFCI 242
                   :..::||:|...|.|| ...|.|..:..|:|.               |||
Zfish   378 DGGRQRDVEKVKERERDGGRQRDGERDRERERDGGRQRD---------------EER-------- 419

  Fly   243 QLSQRVRARDLEEFFSSVGKVRD 265
             :.||.|.||.|....: ||.||
Zfish   420 -VRQRERDRDRERDRGN-GKHRD 440

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Caper	NP_609095.1	SF-CC1	213..578	CDD:273721	15/53 (28%)
rbmx2	NP_001020337.2	None