DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Caper and Hrb87F

DIOPT Version :9

Sequence 1:	NP_609095.1	Gene:	Caper / 33989	FlyBaseID:	FBgn0031883	Length:	594	Species:	Drosophila melanogaster
Sequence 2:	NP_001163602.1	Gene:	Hrb87F / 48535	FlyBaseID:	FBgn0004237	Length:	385	Species:	Drosophila melanogaster

Alignment Length:	221	Identity:	55/221 - (24%)
Similarity:	94/221 - (42%)	Gaps:	28/221 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly   219 NGADRTTPTELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYI 283
            :|.:.|.|.:|       |.:|...|..|.....|:..|...|.:.||.::...||||.:|..:|
  Fly    13 DGEEITEPEQL-------RKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFI 70

  Fly   284 EFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTGPMRLYVGSLHFNITE 348
            .:.....:..|......::.|..:       |..|.........|.:.....:|:||.|..:..|
  Fly    71 TYSQSYMIDNAQNARPHKIDGRTV-------EPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDE 128

  Fly   349 DMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRLMKVGNVTE 413
            :.||..|:.||:|.::.::.|.:||:.:|:.||.:.:.|...|.:.|        :...:.|.|
  Fly   129 ECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQ--------KTHSIKNKT- 184

  Fly   414 RLDMNTTSLDTDEMDRTGIDLGATGR 439
             ||:. .::...:|||.|   |..||
  Fly   185 -LDVK-KAIAKQDMDRQG---GGGGR 205

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Caper	NP_609095.1	RRM1_RBM39_like	238..310	CDD:240729	16/71 (23%)
		RRM2_RBM23_RBM39	337..409	CDD:240730	20/71 (28%)
		RBM39linker	425..500	CDD:292157	7/15 (47%)
		RRM3_RBM39_like	483..567	CDD:240731
Hrb87F	NP_001163602.1	RRM1_hnRNPA_like	25..102	CDD:241022	18/83 (22%)
Hrb87F	NP_001163602.1	RRM_SF	116..188	CDD:302621	24/81 (30%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45463934
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840