Protein Alignment Caper and srsf5b

DIOPT Version :10

• Sequence 1: NP_609095.1
• Gene: Caper / 33989
• FlyBaseID: FBgn0031883
• Length: 594
• Species: Drosophila melanogaster
• Sequence 2: NP_001002610.1
• Gene: srsf5b / 436883
• ZFINID: ZDB-GENE-040718-354
• Length: 285
• Species: Danio rerio
• Alignment Length: 211
• Identity: 50/211 - (23%)
• Similarity: 92/211 - (43%)
• Gaps: 35/211 - (16%)

  Fly   239 VFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDDPESVALAL-GLSGQRL 302
            :|..:|:...|.:|:|.||...|::||:.|      ||  |..::|||||.....|: .|.|:.|
Zfish     6 IFIGRLNPSAREKDVERFFKGYGRIRDIDL------KR--GFGFVEFDDPRDAEDAVYELDGKEL 62

  Fly   303 LGVPIMVQHTQA--EKNRLQNAAPAFQPKSHTG---------PM----RLYVGSLHFNITEDMLR 352
            ....:.::|.:.  ...|.:.....|..:...|         ||    ||.|.:|...::...|:
Zfish    63 CNERVTIEHARVRLRGGRGRGGGGRFPARYGRGSQDSRRNPPPMRTENRLIVENLSSRVSWQDLK 127

  Fly   353 GIFEPFGKI---DAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRLMKVGNVTER 414
            ......|::   ||.:..::.        |.:.:.:..|.|.|||:|:|.|:.||.:|:...:.:
Zfish   128 DFMRQAGEVTFADAHRPNLNE--------GVVEFASHSDLKNALEKLSGKEINGRKIKLVEASRK 184

  Fly   415 LDMNTTSLDTDEMDRT 430
            ...:.:..::....|:
Zfish   185 KSRSRSRSNSSSRSRS 200

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Caper	NP_609095.1	SF-CC1	213..578	CDD:273721	50/211 (24%)
srsf5b	NP_001002610.1	RRM1_SRSF5	5..74	CDD:410008	24/75 (32%)
		RRM2_SRSF5	101..181	CDD:410158	22/87 (25%)