DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Caper and Rb97D

DIOPT Version :9

Sequence 1:	NP_609095.1	Gene:	Caper / 33989	FlyBaseID:	FBgn0031883	Length:	594	Species:	Drosophila melanogaster
Sequence 2:	NP_001014671.1	Gene:	Rb97D / 43231	FlyBaseID:	FBgn0004903	Length:	471	Species:	Drosophila melanogaster

Alignment Length:	289	Identity:	66/289 - (22%)
Similarity:	109/289 - (37%)	Gaps:	77/289 - (26%)

- Green bases have known domain annotations that are detailed below.

  Fly   221 ADRTTPTELSPEERD------ARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKG 279
            |||        ||.|      .|.:|...|:......:|:.|:...|||.||.::....|||.:|
  Fly    18 ADR--------EEDDICELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRG 74

  Fly   280 IAYIEFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNR----------LQNAAPAFQPKS---H 331
            ..:|.:..                  .:||.  :|::||          .:.|.|..:.:|   :
  Fly    75 FGFITYTK------------------SLMVD--RAQENRPHIIDGKTVEAKRALPRPERESRETN 119

  Fly   332 TGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNAD--------- 387
            ....:|:||.|..|..|:.||..|..||.:.:::|:.|..||:.:|:.|:.:.:.|
  Fly   120 ISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKK 184

  Fly   388 ---------DAKKALEQLNGFELAGRLMKVGNVTERLDMNTTSLDTDEMDRTGIDLGATGRLQLM 443
                     |.||::..|:..|    ..:.|.:...:   ..||:..:..:.|......|.:|
  Fly   185 QHAIKYVHVDVKKSIYNLDKKE----KQQPGGLANAI---KPSLNQQQQQQGGGQQPPNGNMQ-- 240

  Fly   444 FKLAEGAGLAVPQAAANALLATAPQPAPL 472
               |......||...|.......|.|||:
  Fly   241 ---APSFRPPVPPQQAMGPYQQQPPPAPM 266

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Caper	NP_609095.1	RRM1_RBM39_like	238..310	CDD:240729	15/71 (21%)
		RRM2_RBM23_RBM39	337..409	CDD:240730	23/89 (26%)
		RBM39linker	425..500	CDD:292157	11/48 (23%)
		RRM3_RBM39_like	483..567	CDD:240731
Rb97D	NP_001014671.1	RRM1_hnRNPA_like	33..110	CDD:241022	20/96 (21%)
Rb97D	NP_001014671.1	RRM2_hnRNPA_like	124..196	CDD:240774	19/71 (27%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45463936
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840