Sequence 1: | NP_609095.1 | Gene: | Caper / 33989 | FlyBaseID: | FBgn0031883 | Length: | 594 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001247303.1 | Gene: | msi / 43087 | FlyBaseID: | FBgn0011666 | Length: | 634 | Species: | Drosophila melanogaster |
Alignment Length: | 407 | Identity: | 97/407 - (23%) |
---|---|---|---|
Similarity: | 170/407 - (41%) | Gaps: | 72/407 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 182 QRKRLSPIRERKRSHSRSRDRNSRRR--GTNSPRRRSPPNGADRTTPTELSPEERDAR--TVFCI 242
Fly 243 QLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDDPESVALALGLSGQRLLGVPI 307
Fly 308 MVQHT-QAEKNRLQNAAPAFQPKSHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTE 371
Fly 372 TGRSKGYGFITYHNAD------------------DAKKALEQLNGFELAGRLMKVGNVTERLDMN 418
Fly 419 TTSLDTDEMDRTGIDLGATGRLQLMFKLAEGAGLAVPQAAANALLATAPQPAPLQQQEVAPSIAT 483
Fly 484 QCFILSNMFDPRTETNPTWDVEIRDDVLEECAKHGGVLHIHVDTISHTGTVYVKCPSTTTAVLAV 548
Fly 549 NALHGRWFAGRVITAAY 565 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Caper | NP_609095.1 | RRM1_RBM39_like | 238..310 | CDD:240729 | 21/71 (30%) |
RRM2_RBM23_RBM39 | 337..409 | CDD:240730 | 20/89 (22%) | ||
RBM39linker | 425..500 | CDD:292157 | 20/74 (27%) | ||
RRM3_RBM39_like | 483..567 | CDD:240731 | 19/83 (23%) | ||
msi | NP_001247303.1 | RRM1_hnRNPA_hnRNPD_like | 205..276 | CDD:240771 | 24/81 (30%) |
RRM2_MSI | 292..365 | CDD:240769 | 15/72 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45463938 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |